Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AFA71623.1 | gmk | GPOL_c05540 | GPOL_c22520 | Ribonucleotide reductase small subunit-like protein. | Guanylate kinase Gmk; Essential for recycling GMP and indirectly, cGMP. | 0.905 |
| AFA71623.1 | ndk | GPOL_c05540 | GPOL_c19580 | Ribonucleotide reductase small subunit-like protein. | Nucleoside diphosphate kinase Ndk; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.907 |
| AFA71623.1 | nrdE | GPOL_c05540 | GPOL_c30860 | Ribonucleotide reductase small subunit-like protein. | Ribonucleoside-diphosphate reductase subunit alpha; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.995 |
| AFA71623.1 | nrdF2 | GPOL_c05540 | GPOL_c30840 | Ribonucleotide reductase small subunit-like protein. | Ribonucleoside-diphosphate reductase subunit beta NrdF2; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. | 0.933 |
| AFA71623.1 | nrdI | GPOL_c05540 | GPOL_c30870 | Ribonucleotide reductase small subunit-like protein. | Ribonucleotide reductase NrdI; Probably involved in ribonucleotide reductase function. | 0.904 |
| AFA71623.1 | tmk | GPOL_c05540 | GPOL_c34980 | Ribonucleotide reductase small subunit-like protein. | Thymidylate kinase Tmk; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.918 |
| AFA71692.1 | AFA73290.1 | GPOL_c06230 | GPOL_c22580 | Putative formyltransferase. | Putative RNA-binding Sun protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.955 |
| AFA71692.1 | fmt | GPOL_c06230 | GPOL_c22570 | Putative formyltransferase. | methionyl-tRNA formyltransferase Fmt; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | 0.912 |
| AFA71692.1 | folA | GPOL_c06230 | GPOL_c20700 | Putative formyltransferase. | Dihydrofolate reductase FolA; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis. | 0.929 |
| AFA71692.1 | folD1 | GPOL_c06230 | GPOL_c16380 | Putative formyltransferase. | Bifunctional protein FolD; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.946 |
| AFA71692.1 | folD2 | GPOL_c06230 | GPOL_c28720 | Putative formyltransferase. | Bifunctional protein FolD; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.953 |
| AFA71692.1 | gcvT | GPOL_c06230 | GPOL_c28310 | Putative formyltransferase. | Aminomethyltransferase GcvT; The glycine cleavage system catalyzes the degradation of glycine. | 0.937 |
| AFA71692.1 | glyA1 | GPOL_c06230 | GPOL_c15480 | Putative formyltransferase. | Serine hydroxymethyltransferase GlyA; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.927 |
| AFA71692.1 | glyA2 | GPOL_c06230 | GPOL_c18010 | Putative formyltransferase. | Serine hydroxymethyltransferase GlyA; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.927 |
| AFA71692.1 | gmk | GPOL_c06230 | GPOL_c22520 | Putative formyltransferase. | Guanylate kinase Gmk; Essential for recycling GMP and indirectly, cGMP. | 0.411 |
| AFA71692.1 | guaA | GPOL_c06230 | GPOL_c16120 | Putative formyltransferase. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.438 |
| AFA71692.1 | priA | GPOL_c06230 | GPOL_c22560 | Putative formyltransferase. | Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. | 0.601 |
| AFA71692.1 | purN | GPOL_c06230 | GPOL_c12050 | Putative formyltransferase. | Phosphoribosylglycinamide formyltransferase PurN; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate. | 0.943 |
| AFA71692.1 | purT | GPOL_c06230 | GPOL_c43610 | Putative formyltransferase. | Phosphoribosylglycinamide formyltransferase 2; Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate; Belongs to the PurK/PurT family. | 0.900 |
| AFA71692.1 | thyA | GPOL_c06230 | GPOL_c20690 | Putative formyltransferase. | Thymidylate synthase ThyA; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis. | 0.614 |
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