STRINGSTRING
pyrB pyrB deoA deoA purD purD AFA71225.1 AFA71225.1 AFA75185.1 AFA75185.1 purF purF AFA74921.1 AFA74921.1 AFA74422.1 AFA74422.1 pyrD pyrD pyrF pyrF carA carA AFA73277.1 AFA73277.1 apt apt AFA72769.1 AFA72769.1 AFA72768.1 AFA72768.1 AFA72767.1 AFA72767.1 upp upp alc alc AFA75935.1 AFA75935.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pyrBAspartate carbamoyltransferase PyrB; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. (316 aa)
deoAThymidine phosphorylase DeoA. (448 aa)
purDPhosphoribosylamine--glycine ligase PurD; Belongs to the GARS family. (417 aa)
AFA71225.1Isochorismatase family protein. (194 aa)
AFA75185.1Isochorismatase family protein. (210 aa)
purFAmidophosphoribosyltransferase PurF; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine. (527 aa)
AFA74921.1XdhC family protein. (359 aa)
AFA74422.1Isochorismatase family protein. (204 aa)
pyrDDihydroorotate dehydrogenase PyrD; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. (367 aa)
pyrFOrotidine 5'-phosphate decarboxylase PyrF; Belongs to the OMP decarboxylase family. Type 2 subfamily. (273 aa)
carACarbamoyl-phosphate synthase small chain CarA; Belongs to the CarA family. (389 aa)
AFA73277.1Hypothetical protein. (206 aa)
aptAdenine phosphoribosyltransferase Apt; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. (195 aa)
AFA72769.1Xanthine/uracil permease. (662 aa)
AFA72768.1Putative OHCU decarboxylase. (173 aa)
AFA72767.1Hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily. (108 aa)
uppUracil phosphoribosyltransferase Upp; Belongs to the UPRTase family. (207 aa)
alcAllantoicase Alc; Belongs to the allantoicase family. (345 aa)
AFA75935.1Hypothetical protein. (398 aa)
Your Current Organism:
Gordonia polyisoprenivorans
NCBI taxonomy Id: 1112204
Other names: G. polyisoprenivorans VH2, Gordonia polyisoprenivorans VH2, Gordonia polyisoprenivorans str. VH2, Gordonia polyisoprenivorans strain VH2
Server load: low (36%) [HD]