STRINGSTRING
srtB srtB Spaf_0710 Spaf_0710 Spaf_0739 Spaf_0739 Spaf_1710 Spaf_1710 Spaf_1711 Spaf_1711
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
srtBSurface protein cell wall anchor, sortase_B family. (282 aa)
Spaf_0710Hypothetical protein. (352 aa)
Spaf_0739Putative zinc metalloprotease. (1930 aa)
Spaf_1710Serine protease subtilase family LPXTG cell wall surface protein. (1499 aa)
Spaf_1711Serine protease subtilase family LPXTG cell wall surface protein. (1462 aa)
Your Current Organism:
Streptococcus parasanguinis
NCBI taxonomy Id: 1114965
Other names: S. parasanguinis FW213, Streptococcus parasanguinis FW213, Streptococcus parasanguinis str. FW213, Streptococcus parasanguinis strain FW213
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.