STRINGSTRING
GLAREA_08148 GLAREA_08148 GLAREA_07970 GLAREA_07970 GLAREA_01184 GLAREA_01184 GLAREA_08628 GLAREA_08628 GLAREA_08206 GLAREA_08206 GLAREA_01614 GLAREA_01614 GLAREA_01959 GLAREA_01959 GLAREA_11585 GLAREA_11585 GLAREA_02560 GLAREA_02560 GLAREA_01456 GLAREA_01456 GLAREA_02032 GLAREA_02032 PAN2 PAN2 GLAREA_02951 GLAREA_02951 GLAREA_03061 GLAREA_03061 GLAREA_01731 GLAREA_01731 GLAREA_02358 GLAREA_02358 GLAREA_01836 GLAREA_01836 GLAREA_02568 GLAREA_02568 GLAREA_02332 GLAREA_02332 GLAREA_03034 GLAREA_03034 GLAREA_03210 GLAREA_03210 GLAREA_09683 GLAREA_09683 GLAREA_04756 GLAREA_04756 GLAREA_09923 GLAREA_09923 GLAREA_04700 GLAREA_04700 GLAREA_03379 GLAREA_03379 GLAREA_00152 GLAREA_00152 GLAREA_00384 GLAREA_00384 GLAREA_04009 GLAREA_04009 GLAREA_08544 GLAREA_08544 GLAREA_11617 GLAREA_11617 GLAREA_03827 GLAREA_03827 GLAREA_03406 GLAREA_03406 GLAREA_11884 GLAREA_11884 GLAREA_11909 GLAREA_11909 GLAREA_12114 GLAREA_12114 GLAREA_12401 GLAREA_12401 GLAREA_02098 GLAREA_02098 GLAREA_06034 GLAREA_06034 GLAREA_02519 GLAREA_02519 GLAREA_07463 GLAREA_07463 GLAREA_07634 GLAREA_07634 GLAREA_02810 GLAREA_02810 GLAREA_12121 GLAREA_12121 GLAREA_03100 GLAREA_03100 LSM5 LSM5 GLAREA_06740 GLAREA_06740 GLAREA_03266 GLAREA_03266 GLAREA_03306 GLAREA_03306 LSM4 LSM4 GLAREA_06242 GLAREA_06242 GLAREA_07913 GLAREA_07913 GLAREA_06021 GLAREA_06021 GLAREA_06783 GLAREA_06783 GLAREA_06241 GLAREA_06241 GLAREA_09937 GLAREA_09937 GLAREA_00109 GLAREA_00109 GLAREA_00576 GLAREA_00576 GLAREA_08013 GLAREA_08013 GLAREA_05290 GLAREA_05290 GLAREA_11129 GLAREA_11129 GLAREA_05565 GLAREA_05565 GLAREA_05133 GLAREA_05133 GLAREA_11088 GLAREA_11088 GLAREA_09020 GLAREA_09020 GLAREA_05668 GLAREA_05668 GLAREA_08823 GLAREA_08823 GLAREA_01475 GLAREA_01475 GLAREA_05442 GLAREA_05442 GLAREA_04008 GLAREA_04008 GLAREA_05567 GLAREA_05567 PAN3 PAN3 GLAREA_07815 GLAREA_07815 GLAREA_03128 GLAREA_03128 LSM1 LSM1 GLAREA_03238 GLAREA_03238 GLAREA_03298 GLAREA_03298 GLAREA_07114 GLAREA_07114 GLAREA_07194 GLAREA_07194 GLAREA_00126 GLAREA_00126 GLAREA_10300 GLAREA_10300 GLAREA_10435 GLAREA_10435 GLAREA_00873 GLAREA_00873 GLAREA_10948 GLAREA_10948 GLAREA_11291 GLAREA_11291 GLAREA_12811 GLAREA_12811 FEN1 FEN1 GLAREA_05354 GLAREA_05354 GLAREA_05454 GLAREA_05454 GLAREA_05754 GLAREA_05754 GLAREA_08789 GLAREA_08789 GLAREA_07812 GLAREA_07812 GLAREA_06225 GLAREA_06225 GLAREA_07071 GLAREA_07071 GLAREA_07121 GLAREA_07121 GLAREA_10127 GLAREA_10127 GLAREA_10302 GLAREA_10302 GLAREA_05075 GLAREA_05075 GLAREA_05556 GLAREA_05556
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GLAREA_08148Uncharacterized protein. (251 aa)
GLAREA_07970Uncharacterized protein. (285 aa)
GLAREA_01184P-loop containing nucleoside triphosphate hydrolase. (814 aa)
GLAREA_08628Ribosomal protein S5 2-like protein. (252 aa)
GLAREA_08206Uncharacterized protein. (454 aa)
GLAREA_01614Metallo-dependent phosphatase. (569 aa)
GLAREA_01959Ribonuclease H-like protein. (793 aa)
GLAREA_11585Uncharacterized protein. (273 aa)
GLAREA_02560P-loop containing nucleoside triphosphate hydrolase. (739 aa)
GLAREA_01456Uncharacterized protein. (897 aa)
GLAREA_02032Uncharacterized protein. (1374 aa)
PAN2PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent [...] (1160 aa)
GLAREA_02951Uncharacterized protein. (614 aa)
GLAREA_03061P-loop containing nucleoside triphosphate hydrolase; Belongs to the AAA ATPase family. (389 aa)
GLAREA_01731ARM repeat-containing protein. (1270 aa)
GLAREA_02358Ribosomal protein S5 2-like protein. (343 aa)
GLAREA_01836Ribosomal protein S5 2-like protein. (252 aa)
GLAREA_02568RING/U-box. (1564 aa)
GLAREA_02332Sm-like ribonucleoprotein. (131 aa)
GLAREA_03034Nucleic acid-binding protein. (192 aa)
GLAREA_03210Uncharacterized protein. (297 aa)
GLAREA_09683Uncharacterized protein. (676 aa)
GLAREA_04756Nuclear cap-binding protein subunit 2. (180 aa)
GLAREA_09923Ribonuclease H-like protein. (553 aa)
GLAREA_04700Ribonuclease H-like protein. (91 aa)
GLAREA_03379Uncharacterized protein. (248 aa)
GLAREA_00152Uncharacterized protein. (449 aa)
GLAREA_00384Ubiquitin-like protein. (638 aa)
GLAREA_04009Histone H2A; Belongs to the histone H2A family. (142 aa)
GLAREA_08544Uncharacterized protein. (51 aa)
GLAREA_11617Ribonuclease H-like protein. (277 aa)
GLAREA_03827Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (314 aa)
GLAREA_03406Retrovirus zinc finger-like protein. (819 aa)
GLAREA_11884RNA-binding, RBD. (617 aa)
GLAREA_11909eIF4e-like protein; Belongs to the eukaryotic initiation factor 4E family. (249 aa)
GLAREA_12114Uncharacterized protein. (245 aa)
GLAREA_12401Nucleotidyltransferase. (777 aa)
GLAREA_02098Pym, N-terminal. (195 aa)
GLAREA_06034YjeF N-terminal. (705 aa)
GLAREA_02519RNA-binding, RBD. (594 aa)
GLAREA_07463Uncharacterized protein. (514 aa)
GLAREA_07634PAT1 domain-containing protein. (819 aa)
GLAREA_02810RNA-binding, RBD. (672 aa)
GLAREA_12121Uncharacterized protein. (218 aa)
GLAREA_03100Uncharacterized protein. (372 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (84 aa)
GLAREA_06740Dcp2. (862 aa)
GLAREA_03266Nucleic acid-binding protein. (497 aa)
GLAREA_03306Ribonuclease H-like protein. (192 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (126 aa)
GLAREA_06242Homeo. (1824 aa)
GLAREA_07913DNase I-like protein. (763 aa)
GLAREA_06021RNA-binding, RBD. (505 aa)
GLAREA_067835'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. (1389 aa)
GLAREA_06241C2H2 and C2HC zinc finger. (898 aa)
GLAREA_09937ARM repeat-containing protein. (1145 aa)
GLAREA_00109Uncharacterized protein. (2183 aa)
GLAREA_00576TPR-like protein. (870 aa)
GLAREA_08013PAP/OAS1 substrate-binding protein. (1091 aa)
GLAREA_05290WD40 repeat-like protein. (501 aa)
GLAREA_11129Ribonuclease H-like protein. (481 aa)
GLAREA_05565RNase III. (420 aa)
GLAREA_05133zf-C3H1 domain-containing protein. (1274 aa)
GLAREA_11088P-loop containing nucleoside triphosphate hydrolase. (1287 aa)
GLAREA_09020P-loop containing nucleoside triphosphate hydrolase. (1078 aa)
GLAREA_05668Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. (344 aa)
GLAREA_08823PIN; Belongs to the RNR ribonuclease family. (994 aa)
GLAREA_01475Protein DOM34 homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (394 aa)
GLAREA_05442SAM/Pointed. (611 aa)
GLAREA_04008RNA-binding, RBD. (656 aa)
GLAREA_05567ARM repeat-containing protein. (830 aa)
PAN3PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent 5'-3' exo [...] (657 aa)
GLAREA_07815Ribosomal protein S5 2-like protein. (300 aa)
GLAREA_03128PH. (210 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. (164 aa)
GLAREA_03238Ribosomal protein S5 2-like protein. (342 aa)
GLAREA_03298Nuclease. (946 aa)
GLAREA_07114Uncharacterized protein. (284 aa)
GLAREA_07194Nucleic acid-binding protein. (339 aa)
GLAREA_00126ARM repeat-containing protein. (358 aa)
GLAREA_10300P-loop containing nucleoside triphosphate hydrolase; Belongs to the DEAD box helicase family. (566 aa)
GLAREA_10435P-loop containing nucleoside triphosphate hydrolase. (1095 aa)
GLAREA_00873RNA-binding, RBD. (875 aa)
GLAREA_10948mRNA decapping enzyme DcpS N-terminal. (499 aa)
GLAREA_11291Cullin homology; Belongs to the cullin family. (859 aa)
GLAREA_12811RNB domain-containing protein. (1400 aa)
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (342 aa)
GLAREA_05354Uncharacterized protein. (216 aa)
GLAREA_05454Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (581 aa)
GLAREA_05754HRDC-like protein. (147 aa)
GLAREA_08789CCCH zinc finger. (465 aa)
GLAREA_07812Endonuclease. (347 aa)
GLAREA_06225S1 domain-containing protein. (217 aa)
GLAREA_07071RNA-binding, RBD. (793 aa)
GLAREA_07121ARM repeat-containing protein. (825 aa)
GLAREA_10127TPR-like protein. (1425 aa)
GLAREA_10302ARM repeat-containing protein. (939 aa)
GLAREA_05075P-loop containing nucleoside triphosphate hydrolase. (847 aa)
GLAREA_05556WD40 repeat-like protein. (1565 aa)
Your Current Organism:
Glarea lozoyensis
NCBI taxonomy Id: 1116229
Other names: G. lozoyensis ATCC 20868, Glarea lozoyensis ATCC 20868
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