Groups of genes that are frequently observed in each other's genomic neighborhood.
loading ...
currently showing
Databases
Known metabolic pathways, protein complexes, signal transduction pathways, etc ... from curated databases.
loading ...
currently showing
Fusion
Genes that are sometimes fused into single open reading frames.
STRING allows inspection of the interaction evidence for any given network. Choose any of the viewers above (disabled if not applicable in your network).
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
Node Content
empty nodes: proteins of unknown 3D structure
filled nodes: a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GLAREA_05454
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (581 aa)
GLAREA_05133
zf-C3H1 domain-containing protein. (1274 aa)
GLAREA_12599
RNA-binding, RBD. (719 aa)
GLAREA_07071
RNA-binding, RBD. (793 aa)
Your Current Organism:
Glarea lozoyensis
NCBI taxonomy Id: 1116229 Other names: G. lozoyensis ATCC 20868, Glarea lozoyensis ATCC 20868