27 items (Glarea lozoyensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GLAREA_08332	Thioredoxin-like protein. (188 aa)
	GLAREA_07949	Heme-dependent catalase-like protein. (505 aa)
	GLAREA_02149	Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. (158 aa)
	GLAREA_02363	Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. (165 aa)
	GLAREA_02724	Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. (184 aa)
	GLAREA_03299	Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. (219 aa)
	GLAREA_12903	Glutathione peroxidase; Belongs to the glutathione peroxidase family. (223 aa)
	GLAREA_12097	FAD/NAD(P)-binding protein. (397 aa)
	GLAREA_03231	Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. (216 aa)
	GLAREA_06930	Uncharacterized protein. (591 aa)
	GLAREA_05931	Heme-dependent catalase-like protein. (421 aa)
	GLAREA_09466	Thioredoxin; Belongs to the thioredoxin family. (106 aa)
	GLAREA_10263	Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. (509 aa)
	GLAREA_05268	Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. (504 aa)
	GLAREA_07344	Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (230 aa)
	GLAREA_07374	Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. (582 aa)
	GLAREA_03072	Uncharacterized protein. (367 aa)
	GLAREA_03268	Heme-dependent catalase-like protein. (585 aa)
	GLAREA_05963	Heme-dependent catalase-like protein. (488 aa)
	GLAREA_06894	Cu,Zn superoxide dismutase-like protein. (261 aa)
	GLAREA_00343	Cu,Zn superoxide dismutase-like protein. (240 aa)
	GLAREA_00428	Fe,Mn superoxide dismutase (SOD), C-terminal. (280 aa)
	GLAREA_05744	Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide. (713 aa)
	GLAREA_08989	Heme-dependent catalase-like protein. (354 aa)
	GLAREA_12215	Uncharacterized protein. (774 aa)
	GLAREA_11042	Heme-dependent catalase-like protein. (313 aa)
	GLAREA_11328	Protein kinase-like (PK-like). (393 aa)

Your Current Organism:

Glarea lozoyensis

NCBI taxonomy Id: 1116229
Other names: G. lozoyensis ATCC 20868, Glarea lozoyensis ATCC 20868

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GLAREA_00343	GLAREA_00428	S3DRV7	S3DS54	Cu,Zn superoxide dismutase-like protein.	Fe,Mn superoxide dismutase (SOD), C-terminal.	0.477
GLAREA_00343	GLAREA_03072	S3DRV7	S3DKR7	Cu,Zn superoxide dismutase-like protein.	Uncharacterized protein.	0.477
GLAREA_00343	GLAREA_03268	S3DRV7	S3DLC6	Cu,Zn superoxide dismutase-like protein.	Heme-dependent catalase-like protein.	0.465
GLAREA_00343	GLAREA_05268	S3DRV7	S3DDV3	Cu,Zn superoxide dismutase-like protein.	Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.	0.424
GLAREA_00343	GLAREA_05744	S3DRV7	S3DWT7	Cu,Zn superoxide dismutase-like protein.	Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.	0.465
GLAREA_00343	GLAREA_05931	S3DRV7	S3D702	Cu,Zn superoxide dismutase-like protein.	Heme-dependent catalase-like protein.	0.465
GLAREA_00343	GLAREA_05963	S3DRV7	S3DLM2	Cu,Zn superoxide dismutase-like protein.	Heme-dependent catalase-like protein.	0.465
GLAREA_00343	GLAREA_06894	S3DRV7	S3DP63	Cu,Zn superoxide dismutase-like protein.	Cu,Zn superoxide dismutase-like protein.	0.964
GLAREA_00343	GLAREA_07344	S3DRV7	S3DJJ7	Cu,Zn superoxide dismutase-like protein.	Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.	0.596
GLAREA_00343	GLAREA_07374	S3DRV7	S3DJN4	Cu,Zn superoxide dismutase-like protein.	Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide.	0.465
GLAREA_00343	GLAREA_07949	S3DRV7	S3CFS3	Cu,Zn superoxide dismutase-like protein.	Heme-dependent catalase-like protein.	0.465
GLAREA_00343	GLAREA_08332	S3DRV7	S3CEQ3	Cu,Zn superoxide dismutase-like protein.	Thioredoxin-like protein.	0.602
GLAREA_00343	GLAREA_08989	S3DRV7	S3DY48	Cu,Zn superoxide dismutase-like protein.	Heme-dependent catalase-like protein.	0.465
GLAREA_00343	GLAREA_09466	S3DRV7	S3D8M1	Cu,Zn superoxide dismutase-like protein.	Thioredoxin; Belongs to the thioredoxin family.	0.602
GLAREA_00343	GLAREA_10263	S3DRV7	S3DBT4	Cu,Zn superoxide dismutase-like protein.	Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide.	0.465
GLAREA_00343	GLAREA_11042	S3DRV7	S3EAK8	Cu,Zn superoxide dismutase-like protein.	Heme-dependent catalase-like protein.	0.465
GLAREA_00343	GLAREA_11328	S3DRV7	S3EBD9	Cu,Zn superoxide dismutase-like protein.	Protein kinase-like (PK-like).	0.465
GLAREA_00343	GLAREA_12215	S3DRV7	S3E0T6	Cu,Zn superoxide dismutase-like protein.	Uncharacterized protein.	0.477
GLAREA_00343	GLAREA_12903	S3DRV7	S3CX21	Cu,Zn superoxide dismutase-like protein.	Glutathione peroxidase; Belongs to the glutathione peroxidase family.	0.809
GLAREA_00428	GLAREA_00343	S3DS54	S3DRV7	Fe,Mn superoxide dismutase (SOD), C-terminal.	Cu,Zn superoxide dismutase-like protein.	0.477