STRINGSTRING
GLAREA_12181 GLAREA_12181 GLAREA_08463 GLAREA_08463 GLAREA_01587 GLAREA_01587 GLAREA_03006 GLAREA_03006 GLAREA_04795 GLAREA_04795 GLAREA_01408 GLAREA_01408 GLAREA_07295 GLAREA_07295 GLAREA_09121 GLAREA_09121 GLAREA_08789 GLAREA_08789 GLAREA_12599 GLAREA_12599 GLAREA_04817 GLAREA_04817 GLAREA_10056 GLAREA_10056
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GLAREA_12181RING/U-box. (809 aa)
GLAREA_08463CCCH zinc finger. (262 aa)
GLAREA_01587CCCH zinc finger. (366 aa)
GLAREA_03006Chromo. (1500 aa)
GLAREA_04795CCCH zinc finger. (737 aa)
GLAREA_01408C3H1-type domain-containing protein. (674 aa)
GLAREA_07295P-loop containing nucleoside triphosphate hydrolase. (1157 aa)
GLAREA_09121RING/U-box. (326 aa)
GLAREA_08789CCCH zinc finger. (465 aa)
GLAREA_12599RNA-binding, RBD. (719 aa)
GLAREA_04817RNA-binding, RBD. (209 aa)
GLAREA_10056CCCH zinc finger. (589 aa)
Your Current Organism:
Glarea lozoyensis
NCBI taxonomy Id: 1116229
Other names: G. lozoyensis ATCC 20868, Glarea lozoyensis ATCC 20868
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