Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AFC27108.1 | AFC31591.1 | PM3016_121 | PM3016_4855 | ArgF; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Protein ArgG. | 0.988 |
| AFC27108.1 | AFC32043.1 | PM3016_121 | PM3016_5340 | ArgF; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | RocF; Belongs to the arginase family. | 0.914 |
| AFC27108.1 | AFC32522.1 | PM3016_121 | PM3016_5850 | ArgF; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Hypothetical protein; Belongs to the arginase family. | 0.914 |
| AFC27108.1 | AFC32523.1 | PM3016_121 | PM3016_5851 | ArgF; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | RocF2; Belongs to the arginase family. | 0.914 |
| AFC27108.1 | argB | PM3016_121 | PM3016_119 | ArgF; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.985 |
| AFC27108.1 | argC | PM3016_121 | PM3016_117 | ArgF; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | ArgC; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.952 |
| AFC27108.1 | argC-2 | PM3016_121 | PM3016_4338 | ArgF; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.859 |
| AFC27108.1 | argD | PM3016_121 | PM3016_120 | ArgF; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Acetylornithine and succinylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.974 |
| AFC27108.1 | argG | PM3016_121 | PM3016_122 | ArgF; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | ArgG; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.994 |
| AFC27108.1 | argH | PM3016_121 | PM3016_123 | ArgF; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | ArgH. | 0.960 |
| AFC27108.1 | argH-2 | PM3016_121 | PM3016_4355 | ArgF; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Putative argininosuccinate lyase. | 0.867 |
| AFC27108.1 | argJ | PM3016_121 | PM3016_118 | ArgF; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.996 |
| AFC27108.1 | rocD | PM3016_121 | PM3016_5858 | ArgF; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | RocD; Catalyzes the interconversion of ornithine to glutamate semialdehyde. | 0.852 |
| AFC27235.1 | AFC32288.1 | PM3016_255 | PM3016_5596 | GCN5-like N-acetyltransferase. | GCN5-like N-acetyltransferase; Belongs to the acetyltransferase family. | 0.900 |
| AFC27235.1 | argB | PM3016_255 | PM3016_119 | GCN5-like N-acetyltransferase. | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.902 |
| AFC27235.1 | argJ | PM3016_255 | PM3016_118 | GCN5-like N-acetyltransferase. | ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.905 |
| AFC31591.1 | AFC27108.1 | PM3016_4855 | PM3016_121 | Protein ArgG. | ArgF; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.988 |
| AFC31591.1 | AFC32288.1 | PM3016_4855 | PM3016_5596 | Protein ArgG. | GCN5-like N-acetyltransferase; Belongs to the acetyltransferase family. | 0.408 |
| AFC31591.1 | argB | PM3016_4855 | PM3016_119 | Protein ArgG. | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.884 |
| AFC31591.1 | argC | PM3016_4855 | PM3016_117 | Protein ArgG. | ArgC; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.863 |
page 1 of 11