STRINGSTRING
amaB amaB CCE96836.1 CCE96836.1 CCE96837.1 CCE96837.1 CCE96842.1 CCE96842.1 dht dht gltB1 gltB1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
amaBAmidase, hydantoinase/carbamoylase. (412 aa)
CCE96836.1Putative oxidoreductase. (453 aa)
CCE96837.1Putative dihydropyrimidine dehydrogenase. (437 aa)
CCE96842.1Amidase, hydantoinase/carbamoylase family. (416 aa)
dhtDihydropyrimidinase. (484 aa)
gltB1Glutamate synthase [NADPH] large chain. (1574 aa)
Your Current Organism:
Sinorhizobium fredii HH103
NCBI taxonomy Id: 1117943
Other names: S. fredii HH103, Sinorhizobium fredii str. HH103, Sinorhizobium fredii strain HH103
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