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speb3 speb3 speb1 speb1 amaB amaB allA allA rocF rocF CCE96842.1 CCE96842.1 arcA2 arcA2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
speb3Putative arginase or agmatinase; Belongs to the arginase family. (351 aa)
speb1Agmatinase; Belongs to the arginase family. (318 aa)
amaBAmidase, hydantoinase/carbamoylase. (412 aa)
allAPutative ureidoglycolate hydrolase; Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source. (171 aa)
rocFArginase; Belongs to the arginase family. (307 aa)
CCE96842.1Amidase, hydantoinase/carbamoylase family. (416 aa)
arcA2Arginine deiminase. (418 aa)
Your Current Organism:
Sinorhizobium fredii HH103
NCBI taxonomy Id: 1117943
Other names: S. fredii HH103, Sinorhizobium fredii str. HH103, Sinorhizobium fredii strain HH103
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