STRINGSTRING
JCM15093_1387 JCM15093_1387 JCM15093_1208 JCM15093_1208 JCM15093_1133 JCM15093_1133 queA queA lgt lgt apt apt JCM15093_286 JCM15093_286 JCM15093_284 JCM15093_284 JCM15093_276 JCM15093_276 JCM15093_275 JCM15093_275 murG murG JCM15093_222 JCM15093_222 JCM15093_160 JCM15093_160 JCM15093_93 JCM15093_93 pyrE pyrE JCM15093_41 JCM15093_41 JCM15093_940 JCM15093_940 JCM15093_946 JCM15093_946 JCM15093_998 JCM15093_998 JCM15093_1487 JCM15093_1487 JCM15093_1486 JCM15093_1486 JCM15093_1483 JCM15093_1483 JCM15093_2349 JCM15093_2349 JCM15093_2346 JCM15093_2346 JCM15093_3020 JCM15093_3020 JCM15093_2488 JCM15093_2488 JCM15093_423 JCM15093_423 cobT cobT JCM15093_471 JCM15093_471 JCM15093_543 JCM15093_543 JCM15093_556 JCM15093_556 trpD trpD JCM15093_685 JCM15093_685 JCM15093_687 JCM15093_687 JCM15093_689 JCM15093_689 JCM15093_709 JCM15093_709 mtgA mtgA JCM15093_1354 JCM15093_1354 JCM15093_1295 JCM15093_1295 hisF hisF JCM15093_1234 JCM15093_1234 JCM15093_3548 JCM15093_3548 JCM15093_3554 JCM15093_3554 JCM15093_1971 JCM15093_1971 queA-2 queA-2 JCM15093_2154 JCM15093_2154 JCM15093_2140 JCM15093_2140 xpt xpt mltG mltG JCM15093_2189 JCM15093_2189 hisG hisG JCM15093_2216 JCM15093_2216 JCM15093_2394 JCM15093_2394 rlpA rlpA JCM15093_2571 JCM15093_2571 JCM15093_2574 JCM15093_2574 JCM15093_2662 JCM15093_2662 JCM15093_2669 JCM15093_2669 JCM15093_2872 JCM15093_2872 JCM15093_2897 JCM15093_2897 JCM15093_2896 JCM15093_2896 JCM15093_2941 JCM15093_2941 JCM15093_2983 JCM15093_2983 JCM15093_3155 JCM15093_3155 JCM15093_3291 JCM15093_3291
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
JCM15093_1387Unannotated protein; Belongs to the NadC/ModD family. (279 aa)
JCM15093_1208Unannotated protein. (217 aa)
JCM15093_1133Unannotated protein. (422 aa)
queAUnannotated protein; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). (351 aa)
lgtUnannotated protein; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. (284 aa)
aptUnannotated protein; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. (174 aa)
JCM15093_286Unannotated protein. (343 aa)
JCM15093_284Unannotated protein. (342 aa)
JCM15093_276Unannotated protein. (326 aa)
JCM15093_275Unannotated protein. (397 aa)
murGUnannotated protein; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. (372 aa)
JCM15093_222Unannotated protein; Belongs to the SEDS family. (425 aa)
JCM15093_160Unannotated protein. (702 aa)
JCM15093_93Unannotated protein. (534 aa)
pyrEUnannotated protein; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). (211 aa)
JCM15093_41Unannotated protein; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors. Belongs to the glycosyltransferase 51 family. (648 aa)
JCM15093_940Unannotated protein. (440 aa)
JCM15093_946Unannotated protein; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. (379 aa)
JCM15093_998Unannotated protein; Converts 4-O-beta-D-mannopyranosyl-D-glucopyranose (Man-Glc) to mannose 1-phosphate (Man1P) and glucose; Belongs to the glycosyl hydrolase 130 family. (396 aa)
JCM15093_1487Unannotated protein. (646 aa)
JCM15093_1486Unannotated protein. (417 aa)
JCM15093_1483Unannotated protein. (278 aa)
JCM15093_2349Unannotated protein; Belongs to the purine/pyrimidine phosphoribosyltransferase family. (179 aa)
JCM15093_2346Unannotated protein; Belongs to the multicopper oxidase YfiH/RL5 family. (274 aa)
JCM15093_3020Unannotated protein. (775 aa)
JCM15093_2488Unannotated protein. (669 aa)
JCM15093_423Unannotated protein. (258 aa)
cobTUnannotated protein; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB). (346 aa)
JCM15093_471Unannotated protein. (483 aa)
JCM15093_543Unannotated protein. (376 aa)
JCM15093_556Unannotated protein. (627 aa)
trpDUnannotated protein; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). (331 aa)
JCM15093_685Unannotated protein. (356 aa)
JCM15093_687Unannotated protein. (376 aa)
JCM15093_689Unannotated protein. (384 aa)
JCM15093_709Unannotated protein. (750 aa)
mtgAUnannotated protein; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. (228 aa)
JCM15093_1354Unannotated protein. (374 aa)
JCM15093_1295Unannotated protein. (196 aa)
hisFUnannotated protein; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit. (252 aa)
JCM15093_1234Unannotated protein. (376 aa)
JCM15093_3548Unannotated protein. (402 aa)
JCM15093_3554Unannotated protein. (395 aa)
JCM15093_1971Unannotated protein. (903 aa)
queA-2Unannotated protein; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). (408 aa)
JCM15093_2154Unannotated protein. (676 aa)
JCM15093_2140Unannotated protein. (265 aa)
xptUnannotated protein; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis. (189 aa)
mltGUnannotated protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. (345 aa)
JCM15093_2189Unannotated protein. (463 aa)
hisGUnannotated protein; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Long subfamily. (283 aa)
JCM15093_2216Unannotated protein. (247 aa)
JCM15093_2394Unannotated protein; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. (406 aa)
rlpAUnannotated protein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. (136 aa)
JCM15093_2571Unannotated protein. (206 aa)
JCM15093_2574Unannotated protein. (554 aa)
JCM15093_2662Unannotated protein. (768 aa)
JCM15093_2669Unannotated protein. (773 aa)
JCM15093_2872Unannotated protein. (397 aa)
JCM15093_2897Unannotated protein. (854 aa)
JCM15093_2896Unannotated protein. (550 aa)
JCM15093_2941Unannotated protein; Belongs to the SEDS family. (484 aa)
JCM15093_2983Unannotated protein. (351 aa)
JCM15093_3155Unannotated protein; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. (268 aa)
JCM15093_3291Unannotated protein. (821 aa)
Your Current Organism:
Bacteroides graminisolvens
NCBI taxonomy Id: 1121097
Other names: B. graminisolvens DSM 19988 = JCM 15093, Bacteroides graminisolvens DSM 19988, Bacteroides graminisolvens DSM 19988 = JCM 15093, Bacteroides graminisolvens JCM 15093, Bacteroides graminisolvens JCM 15093 = DSM 19988
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