STRINGSTRING
JCM15093_377 JCM15093_377 JCM15093_1224 JCM15093_1224 JCM15093_1962 JCM15093_1962 pnp pnp JCM15093_2265 JCM15093_2265 JCM15093_2060 JCM15093_2060 JCM15093_2061 JCM15093_2061 JCM15093_1373 JCM15093_1373 JCM15093_1374 JCM15093_1374 JCM15093_2818 JCM15093_2818 JCM15093_423 JCM15093_423 JCM15093_3049 JCM15093_3049 JCM15093_2334 JCM15093_2334 rny rny JCM15093_1435 JCM15093_1435 JCM15093_1518 JCM15093_1518 surE surE JCM15093_30 JCM15093_30 JCM15093_31 JCM15093_31 JCM15093_210 JCM15093_210 JCM15093_212 JCM15093_212 rnhB rnhB JCM15093_362 JCM15093_362 JCM15093_363 JCM15093_363
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
JCM15093_377Unannotated protein; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. (198 aa)
JCM15093_1224Unannotated protein. (184 aa)
JCM15093_1962Unannotated protein. (179 aa)
pnpUnannotated protein; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. (708 aa)
JCM15093_2265Unannotated protein. (292 aa)
JCM15093_2060Unannotated protein; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. (68 aa)
JCM15093_2061Unannotated protein; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. (413 aa)
JCM15093_1373Unannotated protein; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. (159 aa)
JCM15093_1374Unannotated protein. (261 aa)
JCM15093_2818Unannotated protein; Belongs to the 5'-nucleotidase family. (579 aa)
JCM15093_423Unannotated protein. (258 aa)
JCM15093_3049Unannotated protein. (417 aa)
JCM15093_2334Unannotated protein. (188 aa)
rnyUnannotated protein; Endoribonuclease that initiates mRNA decay. (511 aa)
JCM15093_1435Unannotated protein. (261 aa)
JCM15093_1518Unannotated protein. (408 aa)
surEUnannotated protein; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. (257 aa)
JCM15093_30Unannotated protein. (292 aa)
JCM15093_31Unannotated protein. (256 aa)
JCM15093_210Unannotated protein; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA. (146 aa)
JCM15093_212Unannotated protein. (441 aa)
rnhBUnannotated protein; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (199 aa)
JCM15093_362Unannotated protein. (113 aa)
JCM15093_363Unannotated protein; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate. (296 aa)
Your Current Organism:
Bacteroides graminisolvens
NCBI taxonomy Id: 1121097
Other names: B. graminisolvens DSM 19988 = JCM 15093, Bacteroides graminisolvens DSM 19988, Bacteroides graminisolvens DSM 19988 = JCM 15093, Bacteroides graminisolvens JCM 15093, Bacteroides graminisolvens JCM 15093 = DSM 19988
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