STRINGSTRING
JCM15093_1218 JCM15093_1218 JCM15093_1179 JCM15093_1179 JCM15093_1171 JCM15093_1171 JCM15093_1112 JCM15093_1112 purD purD JCM15093_1065 JCM15093_1065 JCM15093_399 JCM15093_399 JCM15093_377 JCM15093_377 JCM15093_376 JCM15093_376 ychF ychF apt apt JCM15093_322 JCM15093_322 JCM15093_296 JCM15093_296 purN purN JCM15093_212 JCM15093_212 JCM15093_201 JCM15093_201 JCM15093_128 JCM15093_128 JCM15093_31 JCM15093_31 JCM15093_30 JCM15093_30 JCM15093_928 JCM15093_928 JCM15093_939 JCM15093_939 surE surE JCM15093_951 JCM15093_951 JCM15093_1543 JCM15093_1543 JCM15093_1515 JCM15093_1515 purC purC truA truA guaA guaA JCM15093_1435 JCM15093_1435 JCM15093_2367 JCM15093_2367 JCM15093_2349 JCM15093_2349 adk adk JCM15093_2313 JCM15093_2313 JCM15093_2532 JCM15093_2532 GCA_000428125_00961 GCA_000428125_00961 JCM15093_3045 JCM15093_3045 purT purT JCM15093_2504 JCM15093_2504 JCM15093_2477 JCM15093_2477 JCM15093_3510 JCM15093_3510 JCM15093_3511 JCM15093_3511 JCM15093_423 JCM15093_423 JCM15093_424 JCM15093_424 JCM15093_556 JCM15093_556 JCM15093_617 JCM15093_617 JCM15093_628 JCM15093_628 JCM15093_677 JCM15093_677 JCM15093_737 JCM15093_737 JCM15093_760 JCM15093_760 GCA_000428125_01439 GCA_000428125_01439 JCM15093_2818 JCM15093_2818 JCM15093_3062 JCM15093_3062 JCM15093_3604 JCM15093_3604 JCM15093_1694 JCM15093_1694 JCM15093_1410 JCM15093_1410 JCM15093_1375 JCM15093_1375 JCM15093_1360 JCM15093_1360 JCM15093_1345 JCM15093_1345 JCM15093_1342 JCM15093_1342 JCM15093_1252 JCM15093_1252 JCM15093_1970 JCM15093_1970 JCM15093_2036 JCM15093_2036 JCM15093_1749 JCM15093_1749 GCA_000428125_02032 GCA_000428125_02032 JCM15093_1786 JCM15093_1786 JCM15093_1813 JCM15093_1813 JCM15093_2161 JCM15093_2161 JCM15093_2147 JCM15093_2147 xpt xpt JCM15093_1917 JCM15093_1917 JCM15093_2732 JCM15093_2732 JCM15093_2710 JCM15093_2710 guaB guaB purE purE JCM15093_2413 JCM15093_2413 JCM15093_2276 JCM15093_2276 gmk gmk JCM15093_2262 JCM15093_2262 tilS tilS JCM15093_2763 JCM15093_2763 JCM15093_2785 JCM15093_2785 JCM15093_2685 JCM15093_2685 JCM15093_3135 JCM15093_3135 JCM15093_2862 JCM15093_2862 purA purA JCM15093_2948 JCM15093_2948 JCM15093_2990 JCM15093_2990 JCM15093_3155 JCM15093_3155 JCM15093_3289 JCM15093_3289 JCM15093_3497 JCM15093_3497
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
JCM15093_1218Unannotated protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. (90 aa)
JCM15093_1179Unannotated protein; Belongs to the pyruvate kinase family. (484 aa)
JCM15093_1171Unannotated protein. (200 aa)
JCM15093_1112Unannotated protein. (310 aa)
purDUnannotated protein; Belongs to the GARS family. (424 aa)
JCM15093_1065Unannotated protein; Belongs to the LOG family. (195 aa)
JCM15093_399Unannotated protein. (205 aa)
JCM15093_377Unannotated protein; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. (198 aa)
JCM15093_376Unannotated protein. (293 aa)
ychFUnannotated protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. (367 aa)
aptUnannotated protein; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. (174 aa)
JCM15093_322Unannotated protein; Belongs to the LOG family. (187 aa)
JCM15093_296Unannotated protein. (230 aa)
purNUnannotated protein; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate. (190 aa)
JCM15093_212Unannotated protein. (441 aa)
JCM15093_201Unannotated protein. (155 aa)
JCM15093_128Unannotated protein. (310 aa)
JCM15093_31Unannotated protein. (256 aa)
JCM15093_30Unannotated protein. (292 aa)
JCM15093_928Unannotated protein. (334 aa)
JCM15093_939Unannotated protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. (747 aa)
surEUnannotated protein; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. (257 aa)
JCM15093_951Unannotated protein; Acts as a magnesium transporter. (446 aa)
JCM15093_1543Unannotated protein. (481 aa)
JCM15093_1515Unannotated protein. (388 aa)
purCUnannotated protein; Belongs to the SAICAR synthetase family. (313 aa)
truAUnannotated protein; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (253 aa)
guaAUnannotated protein; Catalyzes the synthesis of GMP from XMP. (507 aa)
JCM15093_1435Unannotated protein. (261 aa)
JCM15093_2367Unannotated protein. (418 aa)
JCM15093_2349Unannotated protein; Belongs to the purine/pyrimidine phosphoribosyltransferase family. (179 aa)
adkUnannotated protein; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. (189 aa)
JCM15093_2313Unannotated protein. (180 aa)
JCM15093_2532Unannotated protein. (269 aa)
GCA_000428125_00961Unannotated protein. (162 aa)
JCM15093_3045Unannotated protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. (737 aa)
purTUnannotated protein; Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate; Belongs to the PurK/PurT family. (388 aa)
JCM15093_2504Unannotated protein. (174 aa)
JCM15093_2477Unannotated protein. (406 aa)
JCM15093_3510Unannotated protein; Belongs to the bacterial histone-like protein family. (90 aa)
JCM15093_3511Unannotated protein; Belongs to the bacterial histone-like protein family. (387 aa)
JCM15093_423Unannotated protein. (258 aa)
JCM15093_424Unannotated protein. (149 aa)
JCM15093_556Unannotated protein. (627 aa)
JCM15093_617Unannotated protein. (230 aa)
JCM15093_628Unannotated protein; Belongs to the UPF0301 (AlgH) family. (207 aa)
JCM15093_677Unannotated protein. (169 aa)
JCM15093_737Unannotated protein. (189 aa)
JCM15093_760Unannotated protein. (543 aa)
GCA_000428125_01439Unannotated protein. (162 aa)
JCM15093_2818Unannotated protein; Belongs to the 5'-nucleotidase family. (579 aa)
JCM15093_3062Unannotated protein; Belongs to the bacterial histone-like protein family. (97 aa)
JCM15093_3604Unannotated protein. (265 aa)
JCM15093_1694Unannotated protein. (332 aa)
JCM15093_1410Unannotated protein; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). (158 aa)
JCM15093_1375Unannotated protein. (581 aa)
JCM15093_1360Unannotated protein. (243 aa)
JCM15093_1345Unannotated protein; Belongs to the bacterial histone-like protein family. (92 aa)
JCM15093_1342Unannotated protein. (447 aa)
JCM15093_1252Unannotated protein. (165 aa)
JCM15093_1970Unannotated protein; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. (847 aa)
JCM15093_2036Unannotated protein; Belongs to the NDK family. (154 aa)
JCM15093_1749Unannotated protein. (177 aa)
GCA_000428125_02032Unannotated protein. (103 aa)
JCM15093_1786Unannotated protein; Belongs to the bacterial histone-like protein family. (92 aa)
JCM15093_1813Unannotated protein. (141 aa)
JCM15093_2161Unannotated protein. (131 aa)
JCM15093_2147Unannotated protein. (155 aa)
xptUnannotated protein; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis. (189 aa)
JCM15093_1917Unannotated protein. (312 aa)
JCM15093_2732Unannotated protein; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. (448 aa)
JCM15093_2710Unannotated protein. (141 aa)
guaBUnannotated protein; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. (491 aa)
purEUnannotated protein; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). (168 aa)
JCM15093_2413Unannotated protein. (132 aa)
JCM15093_2276Unannotated protein. (795 aa)
gmkUnannotated protein; Essential for recycling GMP and indirectly, cGMP. (189 aa)
JCM15093_2262Unannotated protein. (170 aa)
tilSUnannotated protein; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family. (428 aa)
JCM15093_2763Unannotated protein. (345 aa)
JCM15093_2785Unannotated protein. (254 aa)
JCM15093_2685Unannotated protein. (1234 aa)
JCM15093_3135Unannotated protein. (305 aa)
JCM15093_2862Unannotated protein. (290 aa)
purAUnannotated protein; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. (423 aa)
JCM15093_2948Unannotated protein; Belongs to the PurH family. (507 aa)
JCM15093_2990Unannotated protein. (429 aa)
JCM15093_3155Unannotated protein; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. (268 aa)
JCM15093_3289Unannotated protein. (338 aa)
JCM15093_3497Unannotated protein. (252 aa)
Your Current Organism:
Bacteroides graminisolvens
NCBI taxonomy Id: 1121097
Other names: B. graminisolvens DSM 19988 = JCM 15093, Bacteroides graminisolvens DSM 19988, Bacteroides graminisolvens DSM 19988 = JCM 15093, Bacteroides graminisolvens JCM 15093, Bacteroides graminisolvens JCM 15093 = DSM 19988
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