STRINGSTRING
xerC xerC speA speA JCM15093_3597 JCM15093_3597 JCM15093_180 JCM15093_180 JCM15093_72 JCM15093_72 JCM15093_70 JCM15093_70 JCM15093_14 JCM15093_14 JCM15093_429 JCM15093_429 JCM15093_431 JCM15093_431 JCM15093_498 JCM15093_498 JCM15093_629 JCM15093_629 JCM15093_3082 JCM15093_3082 JCM15093_3058 JCM15093_3058 JCM15093_1629 JCM15093_1629 JCM15093_1392 JCM15093_1392 JCM15093_1328 JCM15093_1328 JCM15093_1321 JCM15093_1321 JCM15093_2580 JCM15093_2580 JCM15093_1789 JCM15093_1789 JCM15093_3222 JCM15093_3222 JCM15093_2388 JCM15093_2388 JCM15093_3165 JCM15093_3165 GCA_000428125_03026 GCA_000428125_03026 JCM15093_3157 JCM15093_3157
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
xerCUnannotated protein; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. (316 aa)
speAUnannotated protein; Catalyzes the biosynthesis of agmatine from arginine. (630 aa)
JCM15093_3597Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (378 aa)
JCM15093_180Unannotated protein. (287 aa)
JCM15093_72Unannotated protein. (416 aa)
JCM15093_70Unannotated protein; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate. (360 aa)
JCM15093_14Unannotated protein. (398 aa)
JCM15093_429Unannotated protein; Belongs to the agmatine deiminase family. (370 aa)
JCM15093_431Unannotated protein. (294 aa)
JCM15093_498Unannotated protein. (377 aa)
JCM15093_629Unannotated protein. (175 aa)
JCM15093_3082Unannotated protein. (196 aa)
JCM15093_3058Unannotated protein; Belongs to the 'phage' integrase family. (284 aa)
JCM15093_1629Unannotated protein; Belongs to the aldehyde dehydrogenase family. (1157 aa)
JCM15093_1392Unannotated protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily. (226 aa)
JCM15093_1328Unannotated protein; Belongs to the 'phage' integrase family. (340 aa)
JCM15093_1321Unannotated protein. (399 aa)
JCM15093_2580Unannotated protein. (290 aa)
JCM15093_1789Unannotated protein; Belongs to the 'phage' integrase family. (426 aa)
JCM15093_3222Unannotated protein; Belongs to the 'phage' integrase family. (439 aa)
JCM15093_2388Unannotated protein; Belongs to the 'phage' integrase family. (294 aa)
JCM15093_3165Unannotated protein; Belongs to the 'phage' integrase family. (237 aa)
GCA_000428125_03026Unannotated protein. (95 aa)
JCM15093_3157Unannotated protein; Belongs to the 'phage' integrase family. (410 aa)
Your Current Organism:
Bacteroides graminisolvens
NCBI taxonomy Id: 1121097
Other names: B. graminisolvens DSM 19988 = JCM 15093, Bacteroides graminisolvens DSM 19988, Bacteroides graminisolvens DSM 19988 = JCM 15093, Bacteroides graminisolvens JCM 15093, Bacteroides graminisolvens JCM 15093 = DSM 19988
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