(103 nodes) Mixed, incl. Hydrolase activity, hydrolyzing O-glycosyl compounds, and Starch and sucrose metabolism network (Thermoclostridium stercorarium)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AGC67127.1	alpha-1,2-L-fucosidase. (761 aa)
	AGC67128.1	alpha-L-fucosidase. (490 aa)
	glgB	1,4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. (741 aa)
	AGC67186.1	Glycoside hydrolase family 2; Belongs to the glycosyl hydrolase 2 family. (903 aa)
	pelX	Pectate disaccharide-lyase PelX. (1240 aa)
	AGC67247.1	Hypothetical protein. (867 aa)
	lacZ1	Beta-galactosidase LacZ; Belongs to the glycosyl hydrolase 2 family. (800 aa)
	bxlB	Beta-xylosidase BxlB. (715 aa)
	AGC67292.1	Hypothetical protein. (652 aa)
	AGC67293.1	Glycoside hydrolase family 15. (650 aa)
	bglZ	Beta-glucosidase BglZ; Belongs to the glycosyl hydrolase 3 family. (794 aa)
	bglB	Thermostable beta-glucosidase B; Belongs to the glycosyl hydrolase 3 family. (751 aa)
	gtaB	UTP--glucose-1-phosphate uridylyltransferase GtaB. (289 aa)
	cepA	Cellobiose-phosphorylase CepA. (811 aa)
	agaR1	Alpha-galactosidase 1. (732 aa)
	agaR2	Putative aga operon transcriptional repressor AgaR. (255 aa)
	xyl	beta-D-xylosidase; Belongs to the glycosyl hydrolase 43 family. (497 aa)
	AGC67522.1	Glycoside hydrolase family 65. (688 aa)
	AGC67611.1	Lysyl aminopeptidase. (348 aa)
	AGC67612.1	Peptidase M42 family protein. (343 aa)
	celM	Putative aminopeptidase CelM. (331 aa)
	AGC67614.1	Carbohydrate-binding family 25 protein. (143 aa)
	arfB	alpha-L-arabinofuranosidase ArfB. (490 aa)
	lacZ2	Beta-galactosidase LacZ. (1023 aa)
	glgA1	Glycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose. (484 aa)
	xynC1	Endo-1,4-beta-xylanase. (1032 aa)
	xynB	Endo-1,4-beta-xylanase XynB. (387 aa)
	xynD	Arabinoxylan arabinofuranohydrolase XynD. (1221 aa)
	AGC67759.1	Endo-alpha-xylanase. (415 aa)
	AGC67829.1	Hypothetical protein. (150 aa)
	AGC67830.1	Endopygalactorunase; Belongs to the glycosyl hydrolase 28 family. (455 aa)
	mro	Aldose 1-epimerase Mro; Converts alpha-aldose to the beta-anomer. (343 aa)
	lplD	Putative glucosidase LplD. (462 aa)
	AGC67860.1	Transcriptional regulator, DeoR family. (254 aa)
	bxlA	1,4-beta-xylosidase BxlA. (502 aa)
	AGC67892.1	Putative d-4,5-unsaturated alpha-glucuronyl hydrolase. (376 aa)
	glgP	Glycogen phosphorylase GlgP. (854 aa)
	AGC67944.1	Xylose isomerase domain-containing protein. (276 aa)
	arfA	Xylosidase/arabinosidase ArfA; Belongs to the glycosyl hydrolase 43 family. (525 aa)
	AGC67946.1	Putative d-4,5-unsaturated alpha-glucuronyl hydrolase. (364 aa)
	pgl	Polygalacturonase Pgl; Belongs to the glycosyl hydrolase 28 family. (430 aa)
	AGC67967.1	Hypothetical protein. (686 aa)
	AGC67977.1	Putative alpha-glucan phosphorylase. (544 aa)
	malZ	Maltodextrin glucosidase MalZ; Belongs to the glycosyl hydrolase 13 family. (635 aa)
	lacZ3	Beta-galactosidase LacZ; Belongs to the glycosyl hydrolase 2 family. (1146 aa)
	AGC68035.1	Hypothetical protein. (93 aa)
	AGC68039.1	Putative unsaturated rhamnogalacturonyl hydrolase. (348 aa)
	AGC68040.1	Hypothetical protein. (218 aa)
	AGC68044.1	Putative unsaturated rhamnogalacturonyl hydrolase. (723 aa)
	AGC68045.1	Putative rhamnogalacturonan acetylesterase. (226 aa)
	AGC68046.1	Putative unsaturated rhamnogalacturonyl hydrolase. (346 aa)
	AGC68049.1	Glycoside hydrolase family 101. (447 aa)
	AGC68053.1	Secreted protein containing DUF1593. (411 aa)
	AGC68055.1	Hypothetical protein. (504 aa)
	AGC68060.1	Hypothetical protein. (467 aa)
	ramA	alfa-L-rhamnosidase RamA. (926 aa)
	AGC68062.1	Putative trehalase / alfa-L-rhamnosidase / mannosyl oligosaccharide glucosidase. (432 aa)
	AGC68195.1	S-layer domain protein. (653 aa)
	AGC68197.1	CtpA-like serine protease; Belongs to the peptidase S41A family. (495 aa)
	AGC68198.1	Hypothetical protein. (385 aa)
	lacC	Tagatose-6-phosphate kinase LacC; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. (314 aa)
	cbG	Beta-glucosidase. (947 aa)
	uidA	Beta-glucuronidase UidA; Belongs to the glycosyl hydrolase 2 family. (593 aa)
	pgcA	Phosphoglucomutase PgcA. (575 aa)
	AGC68608.1	Hypothetical protein. (670 aa)
	agaR3	Alpha-galactosidase 1. (736 aa)
	AGC68671.1	Hypothetical protein. (433 aa)
	xynA1	Endo-1,4-beta-xylanase A. (1808 aa)
	AGC68693.1	Hypothetical protein. (55 aa)
	sDR	Short-chain dehydrogenase/reductase SDR. (262 aa)
	pulA	Pullulanase PulA; Belongs to the glycosyl hydrolase 13 family. (1638 aa)
	celZ	Endoglucanase Z. (986 aa)
	celY	Exoglucanase-2. (914 aa)
	xynA	Endo-1,4-beta-xylanase A; Belongs to the glycosyl hydrolase 11 (cellulase G) family. (651 aa)
	AGC69016.1	Hypothetical protein; Belongs to the UPF0371 family. (494 aa)
	AGC69020.1	Hypothetical protein. (54 aa)
	AGC69021.1	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (456 aa)
	AGC69025.1	Hypothetical protein. (45 aa)
	glgC	Glucose-1-phosphate adenylyltransferase GlgC; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. (426 aa)
	glgD	Glucose-1-phosphate adenylyltransferase GlgD; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. (373 aa)
	AGC69028.1	Hypothetical protein. (283 aa)
	AGC69029.1	Hypothetical protein. (346 aa)
	AGC69032.1	Glycoside hydrolase family 2 sugar binding protein. (845 aa)
	AGC69059.1	Hypothetical protein. (387 aa)
	ndvB	Protein NdvB. (784 aa)
	glgA2	Glycogen synthase GlgA; Synthesizes alpha-1,4-glucan chains using ADP-glucose. (477 aa)
	AGC69218.1	Sucrose phosphorylase. (570 aa)
	bga	Beta-galactosidase Bga. (776 aa)
	AGC69233.1	Tetratricopeptide repeat containing protein. (1101 aa)
	rtcB	RNA-splicing ligase RtcB. (368 aa)
	AGC69239.1	Hypothetical protein. (63 aa)
	AGC69242.1	Hypothetical protein. (298 aa)
	AGC69243.1	Hypothetical protein. (61 aa)
	galE	UDP-glucose 4-epimerase GalE; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (328 aa)
	galK	Galactokinase GalK; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily. (394 aa)
	galT	Galactose-1-phosphate uridylyltransferase GalT. (323 aa)
	AGC69275.1	Hypothetical protein. (849 aa)
	AGC69276.1	Putative NADH dehydrogenase/NAD(P)H nitroreductase. (167 aa)
	AGC69331.1	Hypothetical protein. (339 aa)
	aguA	Alpha-glucuronidase AguA; Belongs to the glycosyl hydrolase 67 family. (682 aa)
	ugl	Unsaturated glucuronyl hydrolase Ugl. (379 aa)
	xylB2	Xylosidase/arabinosidase XylB; Belongs to the glycosyl hydrolase 43 family. (510 aa)
	pemA	Pectinesterase A. (325 aa)

Your Current Organism:

Thermoclostridium stercorarium

NCBI taxonomy Id: 1121335
Other names: Clostridium stercorarium subsp. stercorarium DSM 8532, T. stercorarium subsp. stercorarium DSM 8532, Thermoclostridium stercorarium subsp. stercorarium DSM 8532

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AGC67127.1	AGC67128.1	Cst_c00960	Cst_c00970	alpha-1,2-L-fucosidase.	alpha-L-fucosidase.	0.979
AGC67127.1	AGC67186.1	Cst_c00960	Cst_c01600	alpha-1,2-L-fucosidase.	Glycoside hydrolase family 2; Belongs to the glycosyl hydrolase 2 family.	0.481
AGC67127.1	AGC67247.1	Cst_c00960	Cst_c02230	alpha-1,2-L-fucosidase.	Hypothetical protein.	0.730
AGC67127.1	AGC67522.1	Cst_c00960	Cst_c05000	alpha-1,2-L-fucosidase.	Glycoside hydrolase family 65.	0.439
AGC67127.1	AGC67830.1	Cst_c00960	Cst_c08310	alpha-1,2-L-fucosidase.	Endopygalactorunase; Belongs to the glycosyl hydrolase 28 family.	0.453
AGC67127.1	AGC67892.1	Cst_c00960	Cst_c08930	alpha-1,2-L-fucosidase.	Putative d-4,5-unsaturated alpha-glucuronyl hydrolase.	0.457
AGC67127.1	AGC68045.1	Cst_c00960	Cst_c10470	alpha-1,2-L-fucosidase.	Putative rhamnogalacturonan acetylesterase.	0.613
AGC67127.1	AGC68046.1	Cst_c00960	Cst_c10480	alpha-1,2-L-fucosidase.	Putative unsaturated rhamnogalacturonyl hydrolase.	0.457
AGC67127.1	AGC68049.1	Cst_c00960	Cst_c10510	alpha-1,2-L-fucosidase.	Glycoside hydrolase family 101.	0.656
AGC67127.1	AGC68053.1	Cst_c00960	Cst_c10550	alpha-1,2-L-fucosidase.	Secreted protein containing DUF1593.	0.617
AGC67127.1	AGC68055.1	Cst_c00960	Cst_c10570	alpha-1,2-L-fucosidase.	Hypothetical protein.	0.552
AGC67127.1	AGC68197.1	Cst_c00960	Cst_c12020	alpha-1,2-L-fucosidase.	CtpA-like serine protease; Belongs to the peptidase S41A family.	0.472
AGC67127.1	AGC68671.1	Cst_c00960	Cst_c16870	alpha-1,2-L-fucosidase.	Hypothetical protein.	0.710
AGC67127.1	AGC69032.1	Cst_c00960	Cst_c20590	alpha-1,2-L-fucosidase.	Glycoside hydrolase family 2 sugar binding protein.	0.421
AGC67127.1	AGC69059.1	Cst_c00960	Cst_c20860	alpha-1,2-L-fucosidase.	Hypothetical protein.	0.597
AGC67127.1	AGC69275.1	Cst_c00960	Cst_c23150	alpha-1,2-L-fucosidase.	Hypothetical protein.	0.449
AGC67127.1	AGC69331.1	Cst_c00960	Cst_c23710	alpha-1,2-L-fucosidase.	Hypothetical protein.	0.408
AGC67127.1	aguA	Cst_c00960	Cst_c23950	alpha-1,2-L-fucosidase.	Alpha-glucuronidase AguA; Belongs to the glycosyl hydrolase 67 family.	0.526
AGC67127.1	arfB	Cst_c00960	Cst_c06040	alpha-1,2-L-fucosidase.	alpha-L-arabinofuranosidase ArfB.	0.400
AGC67127.1	celY	Cst_c00960	Cst_c18970	alpha-1,2-L-fucosidase.	Exoglucanase-2.	0.664

page 1 of 62

Server load: low (22%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Cooccurrence

Textmining

Coexpression

© STRING Consortium 2025

Credits

Access

Info

About