STRINGSTRING
AGC68459.1 AGC68459.1 AGC68403.1 AGC68403.1 AGC68062.1 AGC68062.1 ramA ramA AGC68046.1 AGC68046.1 AGC68044.1 AGC68044.1 AGC68039.1 AGC68039.1 AGC67946.1 AGC67946.1 AGC67892.1 AGC67892.1 AGC67616.1 AGC67616.1 AGC67522.1 AGC67522.1 cepA cepA AGC67293.1 AGC67293.1 AGC67127.1 AGC67127.1 celZ celZ celY celY ndvB ndvB ugl ugl AGC69698.1 AGC69698.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AGC68459.1N-acylglucosamine 2-epimerase; Catalyzes the reversible epimerization of cellobiose to 4-O- beta-D-glucopyranosyl-D-mannose (Glc-Man). (400 aa)
AGC68403.1Glycogen debranching enzyme. (654 aa)
AGC68062.1Putative trehalase / alfa-L-rhamnosidase / mannosyl oligosaccharide glucosidase. (432 aa)
ramAalfa-L-rhamnosidase RamA. (926 aa)
AGC68046.1Putative unsaturated rhamnogalacturonyl hydrolase. (346 aa)
AGC68044.1Putative unsaturated rhamnogalacturonyl hydrolase. (723 aa)
AGC68039.1Putative unsaturated rhamnogalacturonyl hydrolase. (348 aa)
AGC67946.1Putative d-4,5-unsaturated alpha-glucuronyl hydrolase. (364 aa)
AGC67892.1Putative d-4,5-unsaturated alpha-glucuronyl hydrolase. (376 aa)
AGC67616.1N-acylglucosamine 2-epimerase family protein. (679 aa)
AGC67522.1Glycoside hydrolase family 65. (688 aa)
cepACellobiose-phosphorylase CepA. (811 aa)
AGC67293.1Glycoside hydrolase family 15. (650 aa)
AGC67127.1alpha-1,2-L-fucosidase. (761 aa)
celZEndoglucanase Z. (986 aa)
celYExoglucanase-2. (914 aa)
ndvBProtein NdvB. (784 aa)
uglUnsaturated glucuronyl hydrolase Ugl. (379 aa)
AGC69698.1Hypothetical protein. (432 aa)
Your Current Organism:
Thermoclostridium stercorarium
NCBI taxonomy Id: 1121335
Other names: Clostridium stercorarium subsp. stercorarium DSM 8532, T. stercorarium subsp. stercorarium DSM 8532, Thermoclostridium stercorarium subsp. stercorarium DSM 8532
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