STRINGSTRING
bxlB bxlB AGC67054.1 AGC67054.1 glgB glgB AGC67135.1 AGC67135.1 lacZ1 lacZ1 bglZ bglZ bglB bglB AGC67395.1 AGC67395.1 AGC67614.1 AGC67614.1 lacZ2 lacZ2 AGC67871.1 AGC67871.1 malZ malZ lacZ3 lacZ3 AGC68053.1 AGC68053.1 AGC68055.1 AGC68055.1 ramA ramA cbG cbG uidA uidA AGC68654.1 AGC68654.1 pulA pulA celZ celZ celY celY AGC69294.1 AGC69294.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
bxlBBeta-xylosidase BxlB. (715 aa)
AGC67054.1D-galactosyl-beta-1->4-L-rhamnose phosphorylase. (728 aa)
glgB1,4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. (741 aa)
AGC67135.1S-layer domain-containing protein. (955 aa)
lacZ1Beta-galactosidase LacZ; Belongs to the glycosyl hydrolase 2 family. (800 aa)
bglZBeta-glucosidase BglZ; Belongs to the glycosyl hydrolase 3 family. (794 aa)
bglBThermostable beta-glucosidase B; Belongs to the glycosyl hydrolase 3 family. (751 aa)
AGC67395.1Fibronectin type III domain protein. (1318 aa)
AGC67614.1Carbohydrate-binding family 25 protein. (143 aa)
lacZ2Beta-galactosidase LacZ. (1023 aa)
AGC67871.1S-layer domain-containing protein. (816 aa)
malZMaltodextrin glucosidase MalZ; Belongs to the glycosyl hydrolase 13 family. (635 aa)
lacZ3Beta-galactosidase LacZ; Belongs to the glycosyl hydrolase 2 family. (1146 aa)
AGC68053.1Secreted protein containing DUF1593. (411 aa)
AGC68055.1Hypothetical protein. (504 aa)
ramAalfa-L-rhamnosidase RamA. (926 aa)
cbGBeta-glucosidase. (947 aa)
uidABeta-glucuronidase UidA; Belongs to the glycosyl hydrolase 2 family. (593 aa)
AGC68654.1Transglutaminase-like superfamily. (498 aa)
pulAPullulanase PulA; Belongs to the glycosyl hydrolase 13 family. (1638 aa)
celZEndoglucanase Z. (986 aa)
celYExoglucanase-2. (914 aa)
AGC69294.1Hypothetical protein. (629 aa)
Your Current Organism:
Thermoclostridium stercorarium
NCBI taxonomy Id: 1121335
Other names: Clostridium stercorarium subsp. stercorarium DSM 8532, T. stercorarium subsp. stercorarium DSM 8532, Thermoclostridium stercorarium subsp. stercorarium DSM 8532
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