STRINGSTRING
gltA gltA ytsJ ytsJ CCO22466.1 CCO22466.1 CCO22467.1 CCO22467.1 frdB frdB frdA frdA CCO22470.1 CCO22470.1 CCO22837.1 CCO22837.1 gabD gabD icd icd sucD sucD CCO24613.1 CCO24613.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gltACitrate synthase 1; Belongs to the citrate synthase family. (429 aa)
ytsJNADP-dependent malic enzyme (conversion of malate into pyruvate); Function of homologous gene experimentally demonstrated in an other organism; enzyme. (439 aa)
CCO22466.1Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit. (184 aa)
CCO22467.1Putative fumarate hydratase subunit alpha; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (279 aa)
frdBFumarate reductase iron-sulfur subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (245 aa)
frdAFumarate reductase flavoprotein subunit. (617 aa)
CCO22470.1Fumarate reductase respiratory complex transmembrane subunit. (215 aa)
CCO22837.1Aconitate hydratase. (639 aa)
gabDSuccinate-semialdehyde dehydrogenase [NADP+] 1. (454 aa)
icdIsocitrate dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (381 aa)
sucDCoA-binding domain protein; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (698 aa)
CCO24613.1Fumarate reductase respiratory complex transmembrane subunit. (216 aa)
Your Current Organism:
Desulfovibrio hydrothermalis
NCBI taxonomy Id: 1121451
Other names: D. hydrothermalis AM13 = DSM 14728, Desulfovibrio hydrothermalis AM13, Desulfovibrio hydrothermalis AM13 = DSM 14728, Desulfovibrio hydrothermalis DSM 14728, Desulfovibrio hydrothermalis DSM 14728 = AM13
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