STRINGSTRING
ndhC ndhC nuoB nuoB CCO25054.1 CCO25054.1 nuoD nuoD CCO25050.1 CCO25050.1 nuoK nuoK CCO25048.1 CCO25048.1 CCO25046.1 CCO25046.1 nuoM nuoM nuoN nuoN hydA-3 hydA-3 hydB hydB nifJ-2 nifJ-2 CCO24854.1 CCO24854.1 hydN hydN yjgC yjgC rsxA rsxA rsxE rsxE rnfG rnfG CCO24727.1 CCO24727.1 CCO24726.1 CCO24726.1 hydA hydA hybC hybC CCO24613.1 CCO24613.1 CCO24597.1 CCO24597.1 CCO24595.1 CCO24595.1 CCO24594.1 CCO24594.1 CCO24380.1 CCO24380.1 hysB hysB CCO24321.1 CCO24321.1 CCO24232.1 CCO24232.1 fdhA fdhA fdnG fdnG CCO23898.1 CCO23898.1 hmcA hmcA CCO23644.1 CCO23644.1 CCO23576.1 CCO23576.1 CCO23513.1 CCO23513.1 CCO23512.1 CCO23512.1 CCO23511.1 CCO23511.1 CCO23510.1 CCO23510.1 CCO23509.1 CCO23509.1 CCO23182.1 CCO23182.1 CCO23089.1 CCO23089.1 CCO23078.1 CCO23078.1 CCO23060.1 CCO23060.1 CCO23025.1 CCO23025.1 CCO23024.1 CCO23024.1 cydB cydB cydA cydA CCO22820.1 CCO22820.1 CCO22470.1 CCO22470.1 frdA frdA frdB frdB nifJ nifJ CCO22435.1 CCO22435.1 dsvB dsvB CCO22389.1 CCO22389.1 CCO22378.1 CCO22378.1 CCO22377.1 CCO22377.1 CCO22364.1 CCO22364.1 CCO22346.1 CCO22346.1 fd fd CCO22114.1 CCO22114.1 iorA iorA iorB iorB korC korC korB korB rnfG-2 rnfG-2 CCO25149.1 CCO25149.1 CCO25494.1 CCO25494.1 CCO25495.1 CCO25495.1 rsxA-2 rsxA-2 rsxE-2 rsxE-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ndhCNAD(P)H-quinone oxidoreductase subunit 3; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. (125 aa)
nuoBNADH-quinone oxidoreductase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (178 aa)
CCO25054.1NADH dehydrogenase (Ubiquinone) 30 kDa subunit. (171 aa)
nuoDNADH-quinone oxidoreductase subunit D 2; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family. (383 aa)
CCO25050.1NADH-ubiquinone/plastoquinone oxidoreductase chain 6; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (174 aa)
nuoKNADH-quinone oxidoreductase subunit K 1; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family. (102 aa)
CCO25048.1NADH/Ubiquinone/plastoquinone (Complex I). (497 aa)
CCO25046.1NADH/Ubiquinone/plastoquinone (Complex I). (590 aa)
nuoMNADH-quinone oxidoreductase subunit M. (511 aa)
nuoNNADH-quinone oxidoreductase subunit N 2; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family. (473 aa)
hydA-3Periplasmic [Fe] hydrogenase large subunit. (443 aa)
hydBIron hydrogenase small subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (112 aa)
nifJ-2Pyruvate-flavodoxin oxidoreductase; Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family. (1174 aa)
CCO24854.1Cytochrome c class III. (164 aa)
hydNFormate dehydrogenase-H, [4Fe-4S] ferredoxin subunit; Function of homologous gene experimentally demonstrated in an other organism; carrier. (174 aa)
yjgCFragment of putative formate dehydrogenase (part 2); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (195 aa)
rsxAPutative inner membrane subunit of an electron transport system; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. (192 aa)
rsxEPutative inner membrane NADH-quinone reductase; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. (221 aa)
rnfGElectron transport complex, RnfABCDGE type, G subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family. (195 aa)
CCO24727.1Electron transport complex, RnfABCDGE type, D subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family. (324 aa)
CCO24726.1Putative Electron transport complex protein RnfC; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (384 aa)
hydAPeriplasmic [NiFe] hydrogenase small subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (315 aa)
hybCHydrogenase 2, large subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. (569 aa)
CCO24613.1Fumarate reductase respiratory complex transmembrane subunit. (216 aa)
CCO24597.1Cytochrome c class III. (139 aa)
CCO24595.1Formate dehydrogenase subunit alpha (fragment); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (807 aa)
CCO24594.1Putative Formate dehydrogenase, alpha subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (195 aa)
CCO24380.1Periplasmic [NiFeSe] hydrogenase large subunit. (487 aa)
hysBPeriplasmic [NiFeSe] hydrogenase small subunit; Function experimentally demonstrated in the studied genus; enzyme. (315 aa)
CCO24321.1Aldehyde ferredoxin oxidoreductase. (575 aa)
CCO24232.1Ferredoxin thioredoxin reductase beta chain. (129 aa)
fdhAFormate dehydrogenase subunit alpha; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (807 aa)
fdnGPutative formate dehydrogenase, alpha subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (188 aa)
CCO23898.1NADPH-dependent FMN reductase. (191 aa)
hmcAHigh-molecular-weight cytochrome c. (547 aa)
CCO23644.1Respiratory-chain NADH dehydrogenase domain 51 kDa subunit. (441 aa)
CCO23576.1Acidic cytochrome c3. (134 aa)
CCO23513.1NADH/Ubiquinone/plastoquinone (Complex I). (634 aa)
CCO23512.1Respiratory-chain NADH dehydrogenase subunit 1. (282 aa)
CCO23511.1Homologs of previously reported genes of unknown function; Belongs to the complex I 20 kDa subunit family. (144 aa)
CCO23510.1Homologs of previously reported genes of unknown function. (123 aa)
CCO23509.1NADH-ubiquinone oxidoreductase chain 49kDa; Belongs to the complex I 49 kDa subunit family. (358 aa)
CCO23182.1Redoxin domain protein. (162 aa)
CCO23089.1Aldehyde ferredoxin oxidoreductase. (593 aa)
CCO23078.14Fe-4S ferredoxin iron-sulfur binding domain protein. (367 aa)
CCO23060.1Molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (635 aa)
CCO23025.1Pyruvate ferredoxin/flavodoxin oxidoreductase. (180 aa)
CCO23024.1Thiamine pyrophosphate protein domain protein TPP-binding. (252 aa)
cydBCytochrome d ubiquinol oxidase, subunit II; Function of strongly homologous gene; enzyme. (337 aa)
cydACytochrome d ubiquinol oxidase subunit 1; Function of strongly homologous gene; enzyme. (432 aa)
CCO22820.1Ferredoxin-2. (63 aa)
CCO22470.1Fumarate reductase respiratory complex transmembrane subunit. (215 aa)
frdAFumarate reductase flavoprotein subunit. (617 aa)
frdBFumarate reductase iron-sulfur subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (245 aa)
nifJPyruvate-flavodoxin oxidoreductase; Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family. (1174 aa)
CCO22435.1Cytochrome c3. (135 aa)
dsvBSulfite reductase, dissimilatory-type subunit beta. (381 aa)
CCO22389.1Flavodoxin. (146 aa)
CCO22378.1Homologs of previously reported genes of unknown function. (346 aa)
CCO22377.1Cytochrome bd-type quinol oxidase subunit 1-like protein. (822 aa)
CCO22364.1Cytochrome B561. (216 aa)
CCO22346.1NADPH-dependent FMN reductase. (201 aa)
fdFerredoxin-1. (69 aa)
CCO22114.1Homologs of previously reported genes of unknown function. (183 aa)
iorAIndolepyruvate oxidoreductase subunit iorA; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates. (614 aa)
iorBIndolepyruvate oxidoreductase subunit iorB. (195 aa)
korC2-oxoglutarate synthase subunit korC. (207 aa)
korB2-oxoglutarate synthase subunit korB. (278 aa)
rnfG-2Electron transport complex, RnfABCDGE type, G subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family. (189 aa)
CCO25149.1Ferredoxin-3. (62 aa)
CCO25494.1Electron transport complex, RnfABCDGE type, D subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family. (323 aa)
CCO25495.1Putative Electron transport complex protein RnfC; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (384 aa)
rsxA-2Putative inner membrane subunit of an electron transport system; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. (191 aa)
rsxE-2Putative inner membrane NADH-quinone reductase; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. (232 aa)
Your Current Organism:
Desulfovibrio hydrothermalis
NCBI taxonomy Id: 1121451
Other names: D. hydrothermalis AM13 = DSM 14728, Desulfovibrio hydrothermalis AM13, Desulfovibrio hydrothermalis AM13 = DSM 14728, Desulfovibrio hydrothermalis DSM 14728, Desulfovibrio hydrothermalis DSM 14728 = AM13
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