Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CCO22138.1 | CCO22459.1 | DESAM_10157 | DESAM_20168 | Cysteine synthase. | Phosphoadenosine phosphosulfate reductase. | 0.816 |
| CCO22138.1 | CCO23969.1 | DESAM_10157 | DESAM_21692 | Cysteine synthase. | PP-loop domain protein; Belongs to the TtcA family. | 0.451 |
| CCO22138.1 | CCO24951.1 | DESAM_10157 | DESAM_22684 | Cysteine synthase. | PP-loop domain protein. | 0.451 |
| CCO22138.1 | argS | DESAM_10157 | DESAM_20858 | Cysteine synthase. | Arginine--tRNA ligase. | 0.549 |
| CCO22138.1 | glnS | DESAM_10157 | DESAM_21406 | Cysteine synthase. | glutamyl-tRNA synthetase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.491 |
| CCO22138.1 | gltX | DESAM_10157 | DESAM_20230 | Cysteine synthase. | Glutamate--tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu). | 0.491 |
| CCO22138.1 | guaA | DESAM_10157 | DESAM_10115 | Cysteine synthase. | GMP synthetase; Catalyzes the synthesis of GMP from XMP. | 0.760 |
| CCO22138.1 | ileS | DESAM_10157 | DESAM_22252 | Cysteine synthase. | isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily. | 0.496 |
| CCO22138.1 | leuS | DESAM_10157 | DESAM_20254 | Cysteine synthase. | Leucine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.780 |
| CCO22138.1 | metG | DESAM_10157 | DESAM_22475 | Cysteine synthase. | Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.827 |
| CCO22138.1 | nadE | DESAM_10157 | DESAM_10151 | Cysteine synthase. | Putative glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.474 |
| CCO22138.1 | tilS | DESAM_10157 | DESAM_22284 | Cysteine synthase. | tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family. | 0.449 |
| CCO22138.1 | trpS | DESAM_10157 | DESAM_21688 | Cysteine synthase. | Tryptophan--tRNA ligase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.424 |
| CCO22138.1 | tyrS | DESAM_10157 | DESAM_21072 | Cysteine synthase. | Tyrosine--tRNA ligase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily. | 0.644 |
| CCO22138.1 | valS | DESAM_10157 | DESAM_20480 | Cysteine synthase. | valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily. | 0.609 |
| CCO22310.1 | guaA | DESAM_20019 | DESAM_10115 | NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source. | GMP synthetase; Catalyzes the synthesis of GMP from XMP. | 0.547 |
| CCO22310.1 | nadD | DESAM_20019 | DESAM_10098 | NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source. | Putative nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.937 |
| CCO22310.1 | nadE | DESAM_20019 | DESAM_10151 | NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source. | Putative glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.927 |
| CCO22459.1 | CCO22138.1 | DESAM_20168 | DESAM_10157 | Phosphoadenosine phosphosulfate reductase. | Cysteine synthase. | 0.816 |
| CCO22459.1 | sat | DESAM_20168 | DESAM_20547 | Phosphoadenosine phosphosulfate reductase. | Sulfate adenylyltransferase. | 0.766 |
page 1 of 11