Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EPC01813.1 | EPC03800.1 | L861_21545 | L861_00455 | ATPase; with MinC inhibits cell division by blocking formation of the polar Z ring septums; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Rod shape-determining protein Mbl; Functions in MreBCD complex in some organisms; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.611 |
| EPC01813.1 | EPC03801.1 | L861_21545 | L861_00460 | ATPase; with MinC inhibits cell division by blocking formation of the polar Z ring septums; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | 0.841 |
| EPC01813.1 | EPC03802.1 | L861_21545 | L861_00465 | ATPase; with MinC inhibits cell division by blocking formation of the polar Z ring septums; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Rod shape-determining protein MreD; Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins. Belongs to the MreD family. | 0.811 |
| EPC01813.1 | minC | L861_21545 | L861_21550 | ATPase; with MinC inhibits cell division by blocking formation of the polar Z ring septums; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family. | 0.999 |
| EPC01813.1 | minE | L861_21545 | L861_21540 | ATPase; with MinC inhibits cell division by blocking formation of the polar Z ring septums; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Cell division topological specificity factor; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell. | 0.999 |
| EPC03800.1 | EPC01813.1 | L861_00455 | L861_21545 | Rod shape-determining protein Mbl; Functions in MreBCD complex in some organisms; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | ATPase; with MinC inhibits cell division by blocking formation of the polar Z ring septums; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.611 |
| EPC03800.1 | EPC03801.1 | L861_00455 | L861_00460 | Rod shape-determining protein Mbl; Functions in MreBCD complex in some organisms; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | 0.998 |
| EPC03800.1 | EPC03802.1 | L861_00455 | L861_00465 | Rod shape-determining protein Mbl; Functions in MreBCD complex in some organisms; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Rod shape-determining protein MreD; Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins. Belongs to the MreD family. | 0.903 |
| EPC03800.1 | EPC03803.1 | L861_00455 | L861_00470 | Rod shape-determining protein Mbl; Functions in MreBCD complex in some organisms; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | 0.763 |
| EPC03800.1 | EPC03805.1 | L861_00455 | L861_00480 | Rod shape-determining protein Mbl; Functions in MreBCD complex in some organisms; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.708 |
| EPC03800.1 | minC | L861_00455 | L861_21550 | Rod shape-determining protein Mbl; Functions in MreBCD complex in some organisms; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family. | 0.477 |
| EPC03800.1 | tldD | L861_00455 | L861_00485 | Rod shape-determining protein Mbl; Functions in MreBCD complex in some organisms; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Protease TldD; Responsible for the proteolytic maturation of the E. coli pMccB17 plasmid-encoded microcin B17, an exported protein that targets the essential topoisomerase II DNA gyrase; degrades the E. coli plasmid F-encoded CcdA; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.746 |
| EPC03801.1 | EPC01813.1 | L861_00460 | L861_21545 | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | ATPase; with MinC inhibits cell division by blocking formation of the polar Z ring septums; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.841 |
| EPC03801.1 | EPC03800.1 | L861_00460 | L861_00455 | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | Rod shape-determining protein Mbl; Functions in MreBCD complex in some organisms; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.998 |
| EPC03801.1 | EPC03802.1 | L861_00460 | L861_00465 | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | Rod shape-determining protein MreD; Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins. Belongs to the MreD family. | 0.996 |
| EPC03801.1 | EPC03803.1 | L861_00460 | L861_00470 | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | Hypothetical protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | 0.928 |
| EPC03801.1 | EPC03805.1 | L861_00460 | L861_00480 | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.785 |
| EPC03801.1 | minC | L861_00460 | L861_21550 | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family. | 0.922 |
| EPC03801.1 | tldD | L861_00460 | L861_00485 | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | Protease TldD; Responsible for the proteolytic maturation of the E. coli pMccB17 plasmid-encoded microcin B17, an exported protein that targets the essential topoisomerase II DNA gyrase; degrades the E. coli plasmid F-encoded CcdA; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.785 |
| EPC03802.1 | EPC01813.1 | L861_00465 | L861_21545 | Rod shape-determining protein MreD; Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins. Belongs to the MreD family. | ATPase; with MinC inhibits cell division by blocking formation of the polar Z ring septums; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.811 |
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