STRINGSTRING
SHK13270.1 SHK13270.1 pdhA pdhA glyA glyA gcvT gcvT SHK80346.1 SHK80346.1 SHK81378.1 SHK81378.1 SHL12784.1 SHL12784.1 SHL32631.1 SHL32631.1 SHL42018.1 SHL42018.1 gcvP gcvP SHL42735.1 SHL42735.1 SHL42775.1 SHL42775.1 SHL43040.1 SHL43040.1 SHL50058.1 SHL50058.1 gcvH gcvH SHL70707.1 SHL70707.1 SHL82578.1 SHL82578.1 SHL85157.1 SHL85157.1 SHM15393.1 SHM15393.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SHK13270.1Por secretion system C-terminal sorting domain-containing protein. (172 aa)
pdhAPyruvate dehydrogenase E1 component alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (395 aa)
glyAGlycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. (430 aa)
gcvTAminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine. (368 aa)
SHK80346.12-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase). (460 aa)
SHK81378.1Pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component. (806 aa)
SHL12784.1Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase); The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (591 aa)
SHL32631.1Dihydrolipoamide dehydrogenase. (470 aa)
SHL42018.12-oxoisovalerate dehydrogenase E1 component. (687 aa)
gcvPGlycine dehydrogenase (decarboxylating) alpha subunit; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. (971 aa)
SHL42735.12-oxoglutarate dehydrogenase E1 component. (949 aa)
SHL42775.12-oxoglutarate dehydrogenase E2 component; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). (550 aa)
SHL43040.1Dihydrolipoamide dehydrogenase. (468 aa)
SHL50058.1Dihydrolipoamide dehydrogenase. (464 aa)
gcvHGlycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. (126 aa)
SHL70707.1Ribose-phosphate pyrophosphokinase. (309 aa)
SHL82578.1Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component. (469 aa)
SHL85157.1Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. (327 aa)
SHM15393.12-oxoisovalerate dehydrogenase E1 component. (707 aa)
Your Current Organism:
Hymenobacter psychrotolerans
NCBI taxonomy Id: 1121959
Other names: H. psychrotolerans DSM 18569, Hymenobacter psychrotolerans DSM 18569, Hymenobacter psychrotolerans Tibet-IIU11, Hymenobacter sp. Tibet-IIU11
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