STRINGSTRING
gabD_1 gabD_1 garL_1 garL_1 gabD_2 gabD_2 mdh_1 mdh_1 AQZ50168.1 AQZ50168.1 bioK_1 bioK_1 AQZ52154.1 AQZ52154.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gabD_1Succinate-semialdehyde dehydrogenase [NADP(+)] GabD; Belongs to the aldehyde dehydrogenase family. (494 aa)
garL_15-keto-4-deoxy-D-glucarate aldolase; Belongs to the HpcH/HpaI aldolase family. (252 aa)
gabD_2Succinate-semialdehyde dehydrogenase [NADP(+)] GabD. (492 aa)
mdh_1NAD-dependent methanol dehydrogenase. (410 aa)
AQZ50168.1Hypothetical protein. (178 aa)
bioK_1L-Lysine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (451 aa)
AQZ52154.1Alcohol dehydrogenase. (345 aa)
Your Current Organism:
Martelella mediterranea
NCBI taxonomy Id: 1122214
Other names: M. mediterranea DSM 17316, Martelella mediterranea DSM 17316
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.