(52 nodes) Mixed, incl. Glycine, serine and threonine metabolism, and Alpha-ketoglutaric semialdehyde dehydrogenase network (Martelella mediterranea)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AQZ49420.1	Membrane dipeptidase (Peptidase family M19). (329 aa)
	tpa	Taurine--pyruvate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (456 aa)
	AQZ49461.1	Putative peptidase. (394 aa)
	AQZ49708.1	4-hydroxyproline epimerase; Belongs to the proline racemase family. (310 aa)
	AQZ49724.1	Putative acetyltransferase. (203 aa)
	aldH_1	NADP-dependent fatty aldehyde dehydrogenase. (507 aa)
	comC	(2R)-3-sulfolactate dehydrogenase (NADP(+)); Belongs to the LDH2/MDH2 oxidoreductase family. (346 aa)
	pepQ_2	Xaa-Pro dipeptidase. (377 aa)
	aldH_2	NADP-dependent fatty aldehyde dehydrogenase. (507 aa)
	AQZ50106.1	Pyrroline-5-carboxylate reductase. (258 aa)
	aldH_3	NADP-dependent fatty aldehyde dehydrogenase. (506 aa)
	ltaE	Low specificity L-threonine aldolase; Catalyzes the cleavage of L-allo-threonine and L-threonine to glycine and acetaldehyde. (348 aa)
	antA	Anthranilate 1,2-dioxygenase large subunit. (414 aa)
	hcr	NADH oxidoreductase hcr. (360 aa)
	puuB_1	Gamma-glutamylputrescine oxidoreductase. (429 aa)
	puuA	Gamma-glutamylputrescine synthetase PuuA; Belongs to the glutamine synthetase family. (485 aa)
	AQZ50612.1	Dihydrolipoamide dehydrogenase. (392 aa)
	stcD_1	Putative N-methylproline demethylase. (678 aa)
	AQZ51222.1	DNA-binding transcriptional repressor AcrR. (207 aa)
	puuD	Gamma-glutamyl-gamma-aminobutyrate hydrolase PuuD. (257 aa)
	AQZ51718.1	Creatinase. (406 aa)
	soxA	Monomeric sarcosine oxidase. (395 aa)
	bioK_2	L-Lysine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (456 aa)
	gabD_3	Succinate-semialdehyde dehydrogenase [NADP(+)] GabD. (496 aa)
	lrp_3	Leucine-responsive regulatory protein. (162 aa)
	yjiR_1	Putative HTH-type transcriptional regulator YjiR. (439 aa)
	yiaO_5	Extracytoplasmic solute receptor protein YiaO. (340 aa)
	AQZ52147.1	TRAP-type C4-dicarboxylate transport system, small permease component. (193 aa)
	siaT_19	Neu5Ac permease. (427 aa)
	AQZ52149.1	Universal stress protein UspA. (145 aa)
	AQZ52150.1	Arylmalonate decarboxylase. (264 aa)
	tdcB_1	L-threonine dehydratase catabolic TdcB. (332 aa)
	AQZ52152.1	Ectoine utilization protein EutC. (332 aa)
	pepQ_3	Xaa-Pro dipeptidase. (395 aa)
	puuB_2	Gamma-glutamylputrescine oxidoreductase. (432 aa)
	dehH2	Haloacetate dehalogenase H-2. (264 aa)
	hcnC_2	Hydrogen cyanide synthase subunit HcnC precursor. (369 aa)
	hcnB_1	Hydrogen cyanide synthase subunit HcnB. (456 aa)
	hcnC_3	Hydrogen cyanide synthase subunit HcnC precursor. (373 aa)
	gsiC_11	Glutathione transport system permease protein GsiC. (313 aa)
	gsiD_8	Glutathione transport system permease protein GsiD. (290 aa)
	gsiA_11	Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily. (617 aa)
	AQZ53150.1	Sarcosine oxidase, gamma subunit family. (184 aa)
	gcvT_2	Aminomethyltransferase. (983 aa)
	AQZ53152.1	Sarcosine oxidase, delta subunit family. (101 aa)
	dehH1	Haloacetate dehalogenase H-1. (278 aa)
	soxB	Sarcosine oxidase subunit beta. (417 aa)
	AQZ53155.1	Hypothetical protein. (40 aa)
	gcvT_3	Aminomethyltransferase; Belongs to the GcvT family. (837 aa)
	metG_2	Methionine--tRNA ligase. (113 aa)
	proC	Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. (273 aa)
	AQZ53325.1	Hypothetical protein. (166 aa)

Your Current Organism:

Martelella mediterranea

NCBI taxonomy Id: 1122214
Other names: M. mediterranea DSM 17316, Martelella mediterranea DSM 17316

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AQZ49420.1	AQZ53150.1	Mame_00035	Mame_03849	Membrane dipeptidase (Peptidase family M19).	Sarcosine oxidase, gamma subunit family.	0.452
AQZ49420.1	AQZ53152.1	Mame_00035	Mame_03851	Membrane dipeptidase (Peptidase family M19).	Sarcosine oxidase, delta subunit family.	0.473
AQZ49420.1	comC	Mame_00035	Mame_00343	Membrane dipeptidase (Peptidase family M19).	(2R)-3-sulfolactate dehydrogenase (NADP(+)); Belongs to the LDH2/MDH2 oxidoreductase family.	0.726
AQZ49420.1	puuD	Mame_00035	Mame_01941	Membrane dipeptidase (Peptidase family M19).	Gamma-glutamyl-gamma-aminobutyrate hydrolase PuuD.	0.839
AQZ49461.1	AQZ52150.1	Mame_00077	Mame_02827	Putative peptidase.	Arylmalonate decarboxylase.	0.614
AQZ49461.1	AQZ52152.1	Mame_00077	Mame_02829	Putative peptidase.	Ectoine utilization protein EutC.	0.690
AQZ49461.1	bioK_2	Mame_00077	Mame_02819	Putative peptidase.	L-Lysine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.694
AQZ49461.1	pepQ_3	Mame_00077	Mame_02830	Putative peptidase.	Xaa-Pro dipeptidase.	0.903
AQZ49461.1	tpa	Mame_00077	Mame_00076	Putative peptidase.	Taurine--pyruvate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.779
AQZ49708.1	AQZ50106.1	Mame_00325	Mame_00730	4-hydroxyproline epimerase; Belongs to the proline racemase family.	Pyrroline-5-carboxylate reductase.	0.925
AQZ49708.1	AQZ52152.1	Mame_00325	Mame_02829	4-hydroxyproline epimerase; Belongs to the proline racemase family.	Ectoine utilization protein EutC.	0.549
AQZ49708.1	aldH_1	Mame_00325	Mame_00342	4-hydroxyproline epimerase; Belongs to the proline racemase family.	NADP-dependent fatty aldehyde dehydrogenase.	0.730
AQZ49708.1	aldH_2	Mame_00325	Mame_00561	4-hydroxyproline epimerase; Belongs to the proline racemase family.	NADP-dependent fatty aldehyde dehydrogenase.	0.716
AQZ49708.1	aldH_3	Mame_00325	Mame_00810	4-hydroxyproline epimerase; Belongs to the proline racemase family.	NADP-dependent fatty aldehyde dehydrogenase.	0.724
AQZ49708.1	comC	Mame_00325	Mame_00343	4-hydroxyproline epimerase; Belongs to the proline racemase family.	(2R)-3-sulfolactate dehydrogenase (NADP(+)); Belongs to the LDH2/MDH2 oxidoreductase family.	0.510
AQZ49708.1	hcnB_1	Mame_00325	Mame_03286	4-hydroxyproline epimerase; Belongs to the proline racemase family.	Hydrogen cyanide synthase subunit HcnB.	0.469
AQZ49708.1	hcnC_2	Mame_00325	Mame_03284	4-hydroxyproline epimerase; Belongs to the proline racemase family.	Hydrogen cyanide synthase subunit HcnC precursor.	0.439
AQZ49708.1	proC	Mame_00325	Mame_04024	4-hydroxyproline epimerase; Belongs to the proline racemase family.	Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.	0.914
AQZ49724.1	aldH_1	Mame_00341	Mame_00342	Putative acetyltransferase.	NADP-dependent fatty aldehyde dehydrogenase.	0.513
AQZ49724.1	comC	Mame_00341	Mame_00343	Putative acetyltransferase.	(2R)-3-sulfolactate dehydrogenase (NADP(+)); Belongs to the LDH2/MDH2 oxidoreductase family.	0.476