(44 nodes) Mixed, incl. TRAP transporter solute receptor DctP, and TRAP C4-dicarboxylate transport system permease DctM subunit network (Martelella mediterranea)

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Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AQZ49792.1	2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM. (167 aa)
	siaT_4	Neu5Ac permease. (427 aa)
	dctP_2	C4-dicarboxylate-binding periplasmic protein precursor. (348 aa)
	siaT_6	Neu5Ac permease. (429 aa)
	yiaO_2	Extracytoplasmic solute receptor protein YiaO. (333 aa)
	AQZ49883.1	TRAP-type C4-dicarboxylate transport system, small permease component. (165 aa)
	AQZ49884.1	(3R)-hydroxyacyl-ACP dehydratase subunit HadB. (378 aa)
	allR_1	Transcriptional regulator, IclR family. (261 aa)
	AQZ49887.1	Phenylacetic acid degradation protein PaaD. (140 aa)
	bbsF_2	Succinyl-CoA:(R)-benzylsuccinate CoA-transferase subunit BbsF; Belongs to the CoA-transferase III family. (412 aa)
	dctP_3	C4-dicarboxylate-binding periplasmic protein precursor. (407 aa)
	AQZ49912.1	TRAP-type mannitol/chloroaromatic compound transport system, small permease component. (190 aa)
	siaT_7	Neu5Ac permease. (493 aa)
	AQZ50171.1	TRAP transporter solute receptor, TAXI family. (379 aa)
	siaT_8	Neu5Ac permease. (663 aa)
	siaP_1	Neu5Ac-binding protein. (324 aa)
	AQZ50422.1	2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM. (178 aa)
	siaT_9	Neu5Ac permease. (428 aa)
	siaT_10	Neu5Ac permease. (426 aa)
	siaT_11	TRAP transporter small permease protein. (161 aa)
	yiaO_3	Extracytoplasmic solute receptor protein YiaO. (331 aa)
	siaT_12	Neu5Ac permease. (434 aa)
	AQZ51064.1	TRAP-type mannitol/chloroaromatic compound transport system, small permease component. (198 aa)
	dctP_4	C4-dicarboxylate-binding periplasmic protein precursor. (330 aa)
	siaT_13	Neu5Ac permease. (430 aa)
	AQZ51151.1	TRAP-type C4-dicarboxylate transport system, small permease component. (170 aa)
	siaP_2	Neu5Ac-binding protein. (326 aa)
	nlhH_3	Carboxylesterase NlhH. (553 aa)
	aroE_2	Quinate/shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). (301 aa)
	hpd	4-hydroxyphenylpyruvate dioxygenase. (630 aa)
	araB_8	L-arabinolactonase. (300 aa)
	siaP_3	Neu5Ac-binding protein. (328 aa)
	siaP_4	Neu5Ac-binding protein. (327 aa)
	AQZ51595.1	TRAP-type C4-dicarboxylate transport system, small permease component. (169 aa)
	siaT_16	Neu5Ac permease. (431 aa)
	siaP_6	Neu5Ac-binding protein. (327 aa)
	siaT_22	Neu5Ac permease. (174 aa)
	siaT_23	Neu5Ac permease. (426 aa)
	yiaO_7	Extracytoplasmic solute receptor protein YiaO. (332 aa)
	siaT_24	Neu5Ac permease. (598 aa)
	yiaO_8	Extracytoplasmic solute receptor protein YiaO. (332 aa)
	AQZ53443.1	TRAP-type C4-dicarboxylate transport system, small permease component. (167 aa)
	siaT_25	Neu5Ac permease. (421 aa)
	cmr	HTH-type transcriptional regulator Cmr. (231 aa)

Your Current Organism:

Martelella mediterranea

NCBI taxonomy Id: 1122214
Other names: M. mediterranea DSM 17316, Martelella mediterranea DSM 17316

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AQZ49792.1	AQZ50422.1	Mame_00409	Mame_01051	2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM.	2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM.	0.422
AQZ49792.1	dctP_2	Mame_00409	Mame_00411	2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM.	C4-dicarboxylate-binding periplasmic protein precursor.	0.897
AQZ49792.1	siaP_1	Mame_00409	Mame_01050	2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM.	Neu5Ac-binding protein.	0.416
AQZ49792.1	siaP_3	Mame_00409	Mame_02258	2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM.	Neu5Ac-binding protein.	0.433
AQZ49792.1	siaP_6	Mame_00409	Mame_04133	2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM.	Neu5Ac-binding protein.	0.447
AQZ49792.1	siaT_10	Mame_00409	Mame_01535	2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM.	Neu5Ac permease.	0.429
AQZ49792.1	siaT_12	Mame_00409	Mame_01716	2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM.	Neu5Ac permease.	0.412
AQZ49792.1	siaT_13	Mame_00409	Mame_01806	2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM.	Neu5Ac permease.	0.418
AQZ49792.1	siaT_16	Mame_00409	Mame_02261	2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM.	Neu5Ac permease.	0.464
AQZ49792.1	siaT_23	Mame_00409	Mame_04135	2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM.	Neu5Ac permease.	0.494
AQZ49792.1	siaT_25	Mame_00409	Mame_04149	2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM.	Neu5Ac permease.	0.416
AQZ49792.1	siaT_4	Mame_00409	Mame_00410	2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM.	Neu5Ac permease.	0.935
AQZ49792.1	siaT_9	Mame_00409	Mame_01052	2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM.	Neu5Ac permease.	0.457
AQZ49792.1	yiaO_8	Mame_00409	Mame_04147	2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM.	Extracytoplasmic solute receptor protein YiaO.	0.426
AQZ49883.1	AQZ49884.1	Mame_00500	Mame_00501	TRAP-type C4-dicarboxylate transport system, small permease component.	(3R)-hydroxyacyl-ACP dehydratase subunit HadB.	0.912
AQZ49883.1	AQZ49887.1	Mame_00500	Mame_00504	TRAP-type C4-dicarboxylate transport system, small permease component.	Phenylacetic acid degradation protein PaaD.	0.844
AQZ49883.1	AQZ49912.1	Mame_00500	Mame_00529	TRAP-type C4-dicarboxylate transport system, small permease component.	TRAP-type mannitol/chloroaromatic compound transport system, small permease component.	0.524
AQZ49883.1	AQZ50171.1	Mame_00500	Mame_00795	TRAP-type C4-dicarboxylate transport system, small permease component.	TRAP transporter solute receptor, TAXI family.	0.528
AQZ49883.1	allR_1	Mame_00500	Mame_00503	TRAP-type C4-dicarboxylate transport system, small permease component.	Transcriptional regulator, IclR family.	0.847
AQZ49883.1	bbsF_2	Mame_00500	Mame_00505	TRAP-type C4-dicarboxylate transport system, small permease component.	Succinyl-CoA:(R)-benzylsuccinate CoA-transferase subunit BbsF; Belongs to the CoA-transferase III family.	0.469