(13 nodes) Mixed, incl. Leucine-binding protein domain, and Branched-chain amino acid transmembrane transporter activity network (Martelella mediterranea)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AQZ49733.1	Leucine ABC transporter subunit substrate-binding protein LivK. (423 aa)
	AQZ49741.1	Leucine/isoleucine/valine transporter permease subunit; Belongs to the binding-protein-dependent transport system permease family. (343 aa)
	livH_2	LIV-I protein H; Belongs to the binding-protein-dependent transport system permease family. (287 aa)
	livF_2	LIV-I protein F. (237 aa)
	lptB_2	Lipopolysaccharide export system ATP-binding protein LptB. (239 aa)
	AQZ49749.1	Leucine/isoleucine/valine transporter permease subunit; Belongs to the binding-protein-dependent transport system permease family. (347 aa)
	livH_3	LIV-I protein H; Belongs to the binding-protein-dependent transport system permease family. (285 aa)
	livF_3	LIV-I protein F. (242 aa)
	lptB_3	Lipopolysaccharide export system ATP-binding protein LptB. (247 aa)
	AQZ49753.1	Hypothetical protein. (429 aa)
	braC_2	Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor. (402 aa)
	braC_5	Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor. (400 aa)
	braC_6	Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor. (363 aa)

Your Current Organism:

Martelella mediterranea

NCBI taxonomy Id: 1122214
Other names: M. mediterranea DSM 17316, Martelella mediterranea DSM 17316

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AQZ49733.1	AQZ49741.1	Mame_00350	Mame_00358	Leucine ABC transporter subunit substrate-binding protein LivK.	Leucine/isoleucine/valine transporter permease subunit; Belongs to the binding-protein-dependent transport system permease family.	0.825
AQZ49733.1	AQZ49749.1	Mame_00350	Mame_00366	Leucine ABC transporter subunit substrate-binding protein LivK.	Leucine/isoleucine/valine transporter permease subunit; Belongs to the binding-protein-dependent transport system permease family.	0.822
AQZ49733.1	AQZ49753.1	Mame_00350	Mame_00370	Leucine ABC transporter subunit substrate-binding protein LivK.	Hypothetical protein.	0.907
AQZ49733.1	braC_2	Mame_00350	Mame_00545	Leucine ABC transporter subunit substrate-binding protein LivK.	Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor.	0.900
AQZ49733.1	braC_5	Mame_00350	Mame_03218	Leucine ABC transporter subunit substrate-binding protein LivK.	Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor.	0.900
AQZ49733.1	braC_6	Mame_00350	Mame_03451	Leucine ABC transporter subunit substrate-binding protein LivK.	Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor.	0.900
AQZ49733.1	livF_2	Mame_00350	Mame_00360	Leucine ABC transporter subunit substrate-binding protein LivK.	LIV-I protein F.	0.624
AQZ49733.1	livF_3	Mame_00350	Mame_00368	Leucine ABC transporter subunit substrate-binding protein LivK.	LIV-I protein F.	0.714
AQZ49733.1	livH_2	Mame_00350	Mame_00359	Leucine ABC transporter subunit substrate-binding protein LivK.	LIV-I protein H; Belongs to the binding-protein-dependent transport system permease family.	0.812
AQZ49733.1	livH_3	Mame_00350	Mame_00367	Leucine ABC transporter subunit substrate-binding protein LivK.	LIV-I protein H; Belongs to the binding-protein-dependent transport system permease family.	0.764
AQZ49733.1	lptB_2	Mame_00350	Mame_00361	Leucine ABC transporter subunit substrate-binding protein LivK.	Lipopolysaccharide export system ATP-binding protein LptB.	0.827
AQZ49733.1	lptB_3	Mame_00350	Mame_00369	Leucine ABC transporter subunit substrate-binding protein LivK.	Lipopolysaccharide export system ATP-binding protein LptB.	0.787
AQZ49741.1	AQZ49733.1	Mame_00358	Mame_00350	Leucine/isoleucine/valine transporter permease subunit; Belongs to the binding-protein-dependent transport system permease family.	Leucine ABC transporter subunit substrate-binding protein LivK.	0.825
AQZ49741.1	AQZ49749.1	Mame_00358	Mame_00366	Leucine/isoleucine/valine transporter permease subunit; Belongs to the binding-protein-dependent transport system permease family.	Leucine/isoleucine/valine transporter permease subunit; Belongs to the binding-protein-dependent transport system permease family.	0.942
AQZ49741.1	AQZ49753.1	Mame_00358	Mame_00370	Leucine/isoleucine/valine transporter permease subunit; Belongs to the binding-protein-dependent transport system permease family.	Hypothetical protein.	0.875
AQZ49741.1	braC_2	Mame_00358	Mame_00545	Leucine/isoleucine/valine transporter permease subunit; Belongs to the binding-protein-dependent transport system permease family.	Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor.	0.445
AQZ49741.1	braC_5	Mame_00358	Mame_03218	Leucine/isoleucine/valine transporter permease subunit; Belongs to the binding-protein-dependent transport system permease family.	Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor.	0.788
AQZ49741.1	braC_6	Mame_00358	Mame_03451	Leucine/isoleucine/valine transporter permease subunit; Belongs to the binding-protein-dependent transport system permease family.	Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor.	0.406
AQZ49741.1	livF_2	Mame_00358	Mame_00360	Leucine/isoleucine/valine transporter permease subunit; Belongs to the binding-protein-dependent transport system permease family.	LIV-I protein F.	0.961
AQZ49741.1	livF_3	Mame_00358	Mame_00368	Leucine/isoleucine/valine transporter permease subunit; Belongs to the binding-protein-dependent transport system permease family.	LIV-I protein F.	0.888