(46 nodes) ABC-type transporter activity, and Bacterial extracellular solute-binding protein network (Martelella mediterranea)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ugpC_3	Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily. (358 aa)
	araQ_1	L-arabinose transport system permease protein AraQ. (294 aa)
	lacF_1	Lactose transport system permease protein LacF. (311 aa)
	msmE_1	Multiple sugar-binding protein precursor. (430 aa)
	ugpC_4	Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily. (359 aa)
	malK_2	Maltose/maltodextrin import ATP-binding protein MalK; Belongs to the ABC transporter superfamily. (332 aa)
	sugB_3	Trehalose transport system permease protein SugB. (276 aa)
	sugA_2	Trehalose transport system permease protein SugA. (290 aa)
	AQZ50100.1	Putative ABC transporter-binding protein precursor. (437 aa)
	ugpC_7	Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family. (354 aa)
	sugB_4	Trehalose transport system permease protein SugB. (284 aa)
	sugA_3	Trehalose transport system permease protein SugA. (313 aa)
	AQZ50208.1	Maltose-binding periplasmic protein. (451 aa)
	malK_4	Maltose/maltodextrin import ATP-binding protein MalK; Belongs to the ABC transporter superfamily. (364 aa)
	araQ_5	L-arabinose transport system permease protein AraQ. (293 aa)
	lacF_2	Lactose transport system permease protein LacF. (356 aa)
	yesO	Putative ABC transporter substrate-binding protein YesO. (421 aa)
	AQZ50601.1	Maltose-binding periplasmic protein. (452 aa)
	lacF_3	Lactose transport system permease protein LacF. (336 aa)
	araQ_6	L-arabinose transport system permease protein AraQ. (380 aa)
	malK_5	Maltose/maltodextrin import ATP-binding protein MalK; Belongs to the ABC transporter superfamily. (365 aa)
	msmE_2	Multiple sugar-binding protein precursor. (413 aa)
	lacF_6	Lactose transport system permease protein LacF. (306 aa)
	araQ_10	L-arabinose transport system permease protein AraQ. (285 aa)
	ugpC_13	Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily. (361 aa)
	lacG	Lactose transport system permease protein LacG. (274 aa)
	lacF_7	Lactose transport system permease protein LacF. (298 aa)
	lacE_3	Lactose-binding protein precursor. (423 aa)
	sugB_5	Trehalose transport system permease protein SugB. (273 aa)
	sugA_4	Trehalose transport system permease protein SugA. (290 aa)
	lacE_4	Lactose-binding protein precursor. (440 aa)
	malK_7	Maltose/maltodextrin import ATP-binding protein MalK; Belongs to the ABC transporter superfamily. (358 aa)
	sugC_2	Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily. (360 aa)
	araQ_13	L-arabinose transport system permease protein AraQ. (280 aa)
	lacF_9	Lactose transport system permease protein LacF. (297 aa)
	AQZ51442.1	Glycerol-3-phosphate transporter periplasmic binding protein. (417 aa)
	malK_9	Maltose/maltodextrin import ATP-binding protein MalK; Belongs to the ABC transporter superfamily. (361 aa)
	sugC_3	Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily. (389 aa)
	sugB_7	Trehalose transport system permease protein SugB. (272 aa)
	sugA_6	Trehalose transport system permease protein SugA. (314 aa)
	AQZ52162.1	Putative ABC transporter-binding protein precursor. (426 aa)
	malK_13	Maltose/maltodextrin import ATP-binding protein MalK; Belongs to the ABC transporter superfamily. (361 aa)
	araQ_15	L-arabinose transport system permease protein AraQ. (287 aa)
	lacF_11	Lactose transport system permease protein LacF. (317 aa)
	AQZ52550.1	Maltose-binding periplasmic protein. (502 aa)
	ugpC_17	Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily. (361 aa)

Your Current Organism:

Martelella mediterranea

NCBI taxonomy Id: 1122214
Other names: M. mediterranea DSM 17316, Martelella mediterranea DSM 17316

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AQZ50100.1	malK_2	Mame_00724	Mame_00721	Putative ABC transporter-binding protein precursor.	Maltose/maltodextrin import ATP-binding protein MalK; Belongs to the ABC transporter superfamily.	0.956
AQZ50100.1	malK_4	Mame_00724	Mame_01028	Putative ABC transporter-binding protein precursor.	Maltose/maltodextrin import ATP-binding protein MalK; Belongs to the ABC transporter superfamily.	0.860
AQZ50100.1	sugA_2	Mame_00724	Mame_00723	Putative ABC transporter-binding protein precursor.	Trehalose transport system permease protein SugA.	0.990
AQZ50100.1	sugB_3	Mame_00724	Mame_00722	Putative ABC transporter-binding protein precursor.	Trehalose transport system permease protein SugB.	0.982
AQZ50100.1	sugB_4	Mame_00724	Mame_00827	Putative ABC transporter-binding protein precursor.	Trehalose transport system permease protein SugB.	0.471
AQZ50100.1	sugB_5	Mame_00724	Mame_01891	Putative ABC transporter-binding protein precursor.	Trehalose transport system permease protein SugB.	0.470
AQZ50100.1	sugB_7	Mame_00724	Mame_02837	Putative ABC transporter-binding protein precursor.	Trehalose transport system permease protein SugB.	0.455
AQZ50100.1	sugC_2	Mame_00724	Mame_01921	Putative ABC transporter-binding protein precursor.	Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily.	0.860
AQZ50100.1	sugC_3	Mame_00724	Mame_02836	Putative ABC transporter-binding protein precursor.	Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily.	0.860
AQZ50100.1	ugpC_17	Mame_00724	Mame_03705	Putative ABC transporter-binding protein precursor.	Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily.	0.860
AQZ50100.1	ugpC_3	Mame_00724	Mame_00302	Putative ABC transporter-binding protein precursor.	Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily.	0.860
AQZ50100.1	ugpC_4	Mame_00724	Mame_00315	Putative ABC transporter-binding protein precursor.	Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily.	0.860
AQZ50100.1	ugpC_7	Mame_00724	Mame_00825	Putative ABC transporter-binding protein precursor.	Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.	0.860
AQZ50208.1	araQ_1	Mame_00832	Mame_00303	Maltose-binding periplasmic protein.	L-arabinose transport system permease protein AraQ.	0.573
AQZ50208.1	araQ_10	Mame_00832	Mame_01782	Maltose-binding periplasmic protein.	L-arabinose transport system permease protein AraQ.	0.641
AQZ50208.1	araQ_13	Mame_00832	Mame_02102	Maltose-binding periplasmic protein.	L-arabinose transport system permease protein AraQ.	0.653
AQZ50208.1	araQ_15	Mame_00832	Mame_03238	Maltose-binding periplasmic protein.	L-arabinose transport system permease protein AraQ.	0.568
AQZ50208.1	araQ_5	Mame_00832	Mame_01029	Maltose-binding periplasmic protein.	L-arabinose transport system permease protein AraQ.	0.459
AQZ50208.1	lacF_1	Mame_00832	Mame_00304	Maltose-binding periplasmic protein.	Lactose transport system permease protein LacF.	0.605
AQZ50208.1	lacF_11	Mame_00832	Mame_03239	Maltose-binding periplasmic protein.	Lactose transport system permease protein LacF.	0.641