(6 nodes) Glycerophosphodiester transmembrane transport, and ABC-type carbohydrate transporter activity network (Martelella mediterranea)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	araQ_9	L-arabinose transport system permease protein AraQ. (367 aa)
	lacF_5	Lactose transport system permease protein LacF. (332 aa)
	lacE_2	Lactose-binding protein precursor. (427 aa)
	AQZ51251.1	Carbohydrate ABC transporter substrate-binding protein, family. (420 aa)
	lacF_8	Lactose transport system permease protein LacF. (340 aa)
	araQ_12	L-arabinose transport system permease protein AraQ. (350 aa)

Your Current Organism:

Martelella mediterranea

NCBI taxonomy Id: 1122214
Other names: M. mediterranea DSM 17316, Martelella mediterranea DSM 17316

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AQZ51251.1	araQ_12	Mame_01909	Mame_01911	Carbohydrate ABC transporter substrate-binding protein, family.	L-arabinose transport system permease protein AraQ.	0.995
AQZ51251.1	araQ_9	Mame_01909	Mame_01697	Carbohydrate ABC transporter substrate-binding protein, family.	L-arabinose transport system permease protein AraQ.	0.965
AQZ51251.1	lacE_2	Mame_01909	Mame_01699	Carbohydrate ABC transporter substrate-binding protein, family.	Lactose-binding protein precursor.	0.911
AQZ51251.1	lacF_5	Mame_01909	Mame_01698	Carbohydrate ABC transporter substrate-binding protein, family.	Lactose transport system permease protein LacF.	0.962
AQZ51251.1	lacF_8	Mame_01909	Mame_01910	Carbohydrate ABC transporter substrate-binding protein, family.	Lactose transport system permease protein LacF.	0.990
araQ_12	AQZ51251.1	Mame_01911	Mame_01909	L-arabinose transport system permease protein AraQ.	Carbohydrate ABC transporter substrate-binding protein, family.	0.995
araQ_12	araQ_9	Mame_01911	Mame_01697	L-arabinose transport system permease protein AraQ.	L-arabinose transport system permease protein AraQ.	0.902
araQ_12	lacE_2	Mame_01911	Mame_01699	L-arabinose transport system permease protein AraQ.	Lactose-binding protein precursor.	0.967
araQ_12	lacF_5	Mame_01911	Mame_01698	L-arabinose transport system permease protein AraQ.	Lactose transport system permease protein LacF.	0.968
araQ_12	lacF_8	Mame_01911	Mame_01910	L-arabinose transport system permease protein AraQ.	Lactose transport system permease protein LacF.	0.992
araQ_9	AQZ51251.1	Mame_01697	Mame_01909	L-arabinose transport system permease protein AraQ.	Carbohydrate ABC transporter substrate-binding protein, family.	0.965
araQ_9	araQ_12	Mame_01697	Mame_01911	L-arabinose transport system permease protein AraQ.	L-arabinose transport system permease protein AraQ.	0.902
araQ_9	lacE_2	Mame_01697	Mame_01699	L-arabinose transport system permease protein AraQ.	Lactose-binding protein precursor.	0.984
araQ_9	lacF_5	Mame_01697	Mame_01698	L-arabinose transport system permease protein AraQ.	Lactose transport system permease protein LacF.	0.992
araQ_9	lacF_8	Mame_01697	Mame_01910	L-arabinose transport system permease protein AraQ.	Lactose transport system permease protein LacF.	0.968
lacE_2	AQZ51251.1	Mame_01699	Mame_01909	Lactose-binding protein precursor.	Carbohydrate ABC transporter substrate-binding protein, family.	0.911
lacE_2	araQ_12	Mame_01699	Mame_01911	Lactose-binding protein precursor.	L-arabinose transport system permease protein AraQ.	0.967
lacE_2	araQ_9	Mame_01699	Mame_01697	Lactose-binding protein precursor.	L-arabinose transport system permease protein AraQ.	0.984
lacE_2	lacF_5	Mame_01699	Mame_01698	Lactose-binding protein precursor.	Lactose transport system permease protein LacF.	0.983
lacE_2	lacF_8	Mame_01699	Mame_01910	Lactose-binding protein precursor.	Lactose transport system permease protein LacF.	0.965