(16 nodes) Amino acid ABC transporter, permease protein, 3-TM domain, and Bacterial periplasmic substrate-binding proteins network (Martelella mediterranea)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	glnQ_1	Glutamine transport ATP-binding protein GlnQ. (247 aa)
	yhdY_1	Inner membrane amino-acid ABC transporter permease protein YhdY. (362 aa)
	glnP_1	Putative glutamine ABC transporter permease protein GlnP. (368 aa)
	aapJ_1	General L-amino acid-binding periplasmic protein AapJ precursor. (340 aa)
	fliY_1	Sulfate starvation-induced protein 7; Belongs to the bacterial solute-binding protein 3 family. (263 aa)
	yecS_1	Inner membrane amino-acid ABC transporter permease protein YecS. (224 aa)
	fliY_3	Sulfate starvation-induced protein 7; Belongs to the bacterial solute-binding protein 3 family. (280 aa)
	glnP_2	Glutamine transport system permease protein GlnP. (248 aa)
	yecS_2	Inner membrane amino-acid ABC transporter permease protein YecS. (269 aa)
	glnQ_2	Glutamine transport ATP-binding protein GlnQ. (252 aa)
	aapJ_2	General L-amino acid-binding periplasmic protein AapJ precursor. (342 aa)
	glnM_1	Putative glutamine ABC transporter permease protein GlnM. (397 aa)
	yhdY_2	Inner membrane amino-acid ABC transporter permease protein YhdY. (384 aa)
	glnQ_3	Glutamine transport ATP-binding protein GlnQ. (260 aa)
	yxeN	Putative amino-acid permease protein YxeN. (284 aa)
	fliY_4	Sulfate starvation-induced protein 7. (266 aa)

Your Current Organism:

Martelella mediterranea

NCBI taxonomy Id: 1122214
Other names: M. mediterranea DSM 17316, Martelella mediterranea DSM 17316

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
aapJ_1	aapJ_2	Mame_00160	Mame_03491	General L-amino acid-binding periplasmic protein AapJ precursor.	General L-amino acid-binding periplasmic protein AapJ precursor.	0.905
aapJ_1	glnM_1	Mame_00160	Mame_03492	General L-amino acid-binding periplasmic protein AapJ precursor.	Putative glutamine ABC transporter permease protein GlnM.	0.958
aapJ_1	glnP_1	Mame_00160	Mame_00159	General L-amino acid-binding periplasmic protein AapJ precursor.	Putative glutamine ABC transporter permease protein GlnP.	0.983
aapJ_1	glnP_2	Mame_00160	Mame_03256	General L-amino acid-binding periplasmic protein AapJ precursor.	Glutamine transport system permease protein GlnP.	0.582
aapJ_1	glnQ_1	Mame_00160	Mame_00157	General L-amino acid-binding periplasmic protein AapJ precursor.	Glutamine transport ATP-binding protein GlnQ.	0.993
aapJ_1	glnQ_2	Mame_00160	Mame_03258	General L-amino acid-binding periplasmic protein AapJ precursor.	Glutamine transport ATP-binding protein GlnQ.	0.648
aapJ_1	glnQ_3	Mame_00160	Mame_03494	General L-amino acid-binding periplasmic protein AapJ precursor.	Glutamine transport ATP-binding protein GlnQ.	0.966
aapJ_1	yecS_1	Mame_00160	Mame_00292	General L-amino acid-binding periplasmic protein AapJ precursor.	Inner membrane amino-acid ABC transporter permease protein YecS.	0.612
aapJ_1	yecS_2	Mame_00160	Mame_03257	General L-amino acid-binding periplasmic protein AapJ precursor.	Inner membrane amino-acid ABC transporter permease protein YecS.	0.641
aapJ_1	yhdY_1	Mame_00160	Mame_00158	General L-amino acid-binding periplasmic protein AapJ precursor.	Inner membrane amino-acid ABC transporter permease protein YhdY.	0.993
aapJ_1	yhdY_2	Mame_00160	Mame_03493	General L-amino acid-binding periplasmic protein AapJ precursor.	Inner membrane amino-acid ABC transporter permease protein YhdY.	0.967
aapJ_1	yxeN	Mame_00160	Mame_04215	General L-amino acid-binding periplasmic protein AapJ precursor.	Putative amino-acid permease protein YxeN.	0.582
aapJ_2	aapJ_1	Mame_03491	Mame_00160	General L-amino acid-binding periplasmic protein AapJ precursor.	General L-amino acid-binding periplasmic protein AapJ precursor.	0.905
aapJ_2	glnM_1	Mame_03491	Mame_03492	General L-amino acid-binding periplasmic protein AapJ precursor.	Putative glutamine ABC transporter permease protein GlnM.	0.989
aapJ_2	glnP_1	Mame_03491	Mame_00159	General L-amino acid-binding periplasmic protein AapJ precursor.	Putative glutamine ABC transporter permease protein GlnP.	0.958
aapJ_2	glnP_2	Mame_03491	Mame_03256	General L-amino acid-binding periplasmic protein AapJ precursor.	Glutamine transport system permease protein GlnP.	0.568
aapJ_2	glnQ_1	Mame_03491	Mame_00157	General L-amino acid-binding periplasmic protein AapJ precursor.	Glutamine transport ATP-binding protein GlnQ.	0.964
aapJ_2	glnQ_2	Mame_03491	Mame_03258	General L-amino acid-binding periplasmic protein AapJ precursor.	Glutamine transport ATP-binding protein GlnQ.	0.637
aapJ_2	glnQ_3	Mame_03491	Mame_03494	General L-amino acid-binding periplasmic protein AapJ precursor.	Glutamine transport ATP-binding protein GlnQ.	0.990
aapJ_2	yecS_1	Mame_03491	Mame_00292	General L-amino acid-binding periplasmic protein AapJ precursor.	Inner membrane amino-acid ABC transporter permease protein YecS.	0.596