(39 nodes) Mixed, incl. Gfo/Idh/MocA-like oxidoreductase, N-terminal, and Xylose isomerase-like TIM barrel network (Martelella mediterranea)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	glpR_2	Glycerol-3-phosphate regulon repressor. (271 aa)
	AQZ49657.1	Hypothetical protein. (418 aa)
	yjiA_2	Putative GTP-binding protein YjiA. (324 aa)
	AQZ49660.1	YciI-like protein. (95 aa)
	ligC_1	4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase. (334 aa)
	nagC_1	N-acetylglucosamine repressor. (399 aa)
	gfo_2	Glucose--fructose oxidoreductase precursor. (366 aa)
	AQZ49691.1	Trehalose utilization. (213 aa)
	AQZ50182.1	Trehalose utilization protein. (261 aa)
	afr_1	1,5-anhydro-D-fructose reductase. (363 aa)
	iolE_1	Inosose dehydratase. (350 aa)
	ydgJ_1	Putative oxidoreductase YdgJ. (394 aa)
	ydgJ_2	Putative oxidoreductase YdgJ. (336 aa)
	ligC_2	4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase. (359 aa)
	AQZ51050.1	Putative lyase. (132 aa)
	AQZ51255.1	Esterase. (303 aa)
	idhA	Inositol 2-dehydrogenase. (330 aa)
	murR_1	MurPQ operon repressor. (269 aa)
	iolC	5-dehydro-2-deoxygluconokinase. (636 aa)
	iolD	3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Belongs to the TPP enzyme family. (607 aa)
	iolE_2	Inosose dehydratase. (300 aa)
	iolB	5-deoxy-glucuronate isomerase. (271 aa)
	iolG_1	Inositol 2-dehydrogenase. (359 aa)
	AQZ51834.1	Xylose isomerase-like TIM barrel. (253 aa)
	yhhX	Putative oxidoreductase YhhX. (373 aa)
	AQZ52468.1	O-succinylbenzoate synthase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. (449 aa)
	AQZ52469.1	D-tagatose 3-epimerase. (281 aa)
	nicS	Nicotinate degradation protein S. (218 aa)
	AQZ52471.1	Tripartite tricarboxylate transporter TctA family protein. (512 aa)
	AQZ52472.1	Tripartite tricarboxylate transporter TctB family protein. (166 aa)
	AQZ52473.1	Tripartite tricarboxylate transporter family receptor. (336 aa)
	iolI	Inosose isomerase. (275 aa)
	AQZ52475.1	Hypothetical protein. (385 aa)
	afr_3	1,5-anhydro-D-fructose reductase. (384 aa)
	rbsA_11	Ribose import ATP-binding protein RbsA. (259 aa)
	xylH_1	Xylose transport system permease protein XylH; Belongs to the binding-protein-dependent transport system permease family. (376 aa)
	rbsB_11	D-ribose-binding periplasmic protein precursor. (315 aa)
	AQZ53009.1	Gluconate 2-dehydrogenase flavoprotein precursor. (557 aa)
	iolE_3	Inosose dehydratase. (317 aa)

Your Current Organism:

Martelella mediterranea

NCBI taxonomy Id: 1122214
Other names: M. mediterranea DSM 17316, Martelella mediterranea DSM 17316

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AQZ49657.1	AQZ49660.1	Mame_00274	Mame_00277	Hypothetical protein.	YciI-like protein.	0.608
AQZ49657.1	glpR_2	Mame_00274	Mame_00273	Hypothetical protein.	Glycerol-3-phosphate regulon repressor.	0.516
AQZ49657.1	ligC_1	Mame_00274	Mame_00278	Hypothetical protein.	4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase.	0.608
AQZ49657.1	yjiA_2	Mame_00274	Mame_00276	Hypothetical protein.	Putative GTP-binding protein YjiA.	0.608
AQZ49660.1	AQZ49657.1	Mame_00277	Mame_00274	YciI-like protein.	Hypothetical protein.	0.608
AQZ49660.1	glpR_2	Mame_00277	Mame_00273	YciI-like protein.	Glycerol-3-phosphate regulon repressor.	0.417
AQZ49660.1	ligC_1	Mame_00277	Mame_00278	YciI-like protein.	4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase.	0.773
AQZ49660.1	yjiA_2	Mame_00277	Mame_00276	YciI-like protein.	Putative GTP-binding protein YjiA.	0.773
AQZ49691.1	AQZ50182.1	Mame_00308	Mame_00806	Trehalose utilization.	Trehalose utilization protein.	0.645
AQZ49691.1	AQZ51255.1	Mame_00308	Mame_01913	Trehalose utilization.	Esterase.	0.454
AQZ49691.1	AQZ51834.1	Mame_00308	Mame_02507	Trehalose utilization.	Xylose isomerase-like TIM barrel.	0.471
AQZ49691.1	afr_3	Mame_00308	Mame_03164	Trehalose utilization.	1,5-anhydro-D-fructose reductase.	0.522
AQZ49691.1	gfo_2	Mame_00308	Mame_00307	Trehalose utilization.	Glucose--fructose oxidoreductase precursor.	0.902
AQZ49691.1	iolG_1	Mame_00308	Mame_02497	Trehalose utilization.	Inositol 2-dehydrogenase.	0.401
AQZ49691.1	ligC_2	Mame_00308	Mame_01701	Trehalose utilization.	4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase.	0.430
AQZ49691.1	nagC_1	Mame_00308	Mame_00306	Trehalose utilization.	N-acetylglucosamine repressor.	0.602
AQZ49691.1	yhhX	Mame_00308	Mame_02508	Trehalose utilization.	Putative oxidoreductase YhhX.	0.742
AQZ50182.1	AQZ49691.1	Mame_00806	Mame_00308	Trehalose utilization protein.	Trehalose utilization.	0.645
AQZ50182.1	AQZ51834.1	Mame_00806	Mame_02507	Trehalose utilization protein.	Xylose isomerase-like TIM barrel.	0.640
AQZ50182.1	afr_1	Mame_00806	Mame_00807	Trehalose utilization protein.	1,5-anhydro-D-fructose reductase.	0.929