STRINGSTRING
amaB_1 amaB_1 arcA_1 arcA_1 AQZ49795.1 AQZ49795.1 arcA_2 arcA_2 alc alc allA allA AQZ50622.1 AQZ50622.1 amaB_2 amaB_2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
amaB_1N-carbamoyl-L-amino acid hydrolase. (410 aa)
arcA_1Arginine deiminase. (409 aa)
AQZ49795.1Putative allantoin catabolism protein. (247 aa)
arcA_2Arginase; Belongs to the arginase family. (307 aa)
alcAllantoicase; Belongs to the allantoicase family. (343 aa)
allAUreidoglycolate hydrolase; Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source. (165 aa)
AQZ50622.1N-formylglutamate deformylase. (267 aa)
amaB_2N-carbamoyl-L-amino acid hydrolase. (415 aa)
Your Current Organism:
Martelella mediterranea
NCBI taxonomy Id: 1122214
Other names: M. mediterranea DSM 17316, Martelella mediterranea DSM 17316
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