STRINGSTRING
pucG pucG tpa tpa metC_1 metC_1 csd_1 csd_1 csd_2 csd_2 ltaE ltaE hemA hemA AQZ50511.1 AQZ50511.1 gabR_1 gabR_1 selA selA AQZ51067.1 AQZ51067.1 AQZ51145.1 AQZ51145.1 AQZ51149.1 AQZ51149.1 lysN_1 lysN_1 bioK_1 bioK_1 metZ metZ gadB gadB hisC2 hisC2 serC serC aspC_1 aspC_1 bioK_2 bioK_2 yjiR_1 yjiR_1 gcvP gcvP lysN_2 lysN_2 mdeA mdeA alaC alaC AQZ52728.1 AQZ52728.1 csd_3 csd_3 iscS iscS metC_2 metC_2 hisC hisC gabR_2 gabR_2 glyA1 glyA1 aspC_2 aspC_2 argD argD yjiR_2 yjiR_2 wbpE wbpE
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pucGPurine catabolism protein PucG. (394 aa)
tpaTaurine--pyruvate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (456 aa)
metC_1Cystathionine beta-lyase MetC. (386 aa)
csd_1Putative cysteine desulfurase. (425 aa)
csd_2Putative cysteine desulfurase. (485 aa)
ltaELow specificity L-threonine aldolase; Catalyzes the cleavage of L-allo-threonine and L-threonine to glycine and acetaldehyde. (348 aa)
hemA5-aminolevulinate synthase. (404 aa)
AQZ50511.1Omega-amino acid--pyruvate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (442 aa)
gabR_1HTH-type transcriptional regulatory protein GabR. (474 aa)
selAL-seryl-tRNA(Sec) selenium transferase. (410 aa)
AQZ51067.1Aspartate aminotransferase. (402 aa)
AQZ51145.1Omega-amino acid--pyruvate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (441 aa)
AQZ51149.1Aspartate aminotransferase. (411 aa)
lysN_12-aminoadipate transaminase. (457 aa)
bioK_1L-Lysine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (451 aa)
metZO-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide. (394 aa)
gadBGlutamate decarboxylase beta; Belongs to the group II decarboxylase family. (464 aa)
hisC2Histidinol-phosphate aminotransferase 2; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. (374 aa)
serCPhosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine. (392 aa)
aspC_1Aspartate aminotransferase. (385 aa)
bioK_2L-Lysine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (456 aa)
yjiR_1Putative HTH-type transcriptional regulator YjiR. (439 aa)
gcvPGlycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. (954 aa)
lysN_22-aminoadipate transaminase. (408 aa)
mdeAMethionine gamma-lyase. (427 aa)
alaCGlutamate-pyruvate aminotransferase AlaC. (405 aa)
AQZ52728.1Aspartate aminotransferase. (400 aa)
csd_3Putative cysteine desulfurase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. (412 aa)
iscSCysteine desulfurase. (388 aa)
metC_2Cystathionine beta-lyase MetC. (395 aa)
hisCHistidinol-phosphate aminotransferase. (390 aa)
gabR_2HTH-type transcriptional regulatory protein GabR. (492 aa)
glyA1Serine hydroxymethyltransferase 1; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. (434 aa)
aspC_2Aspartate aminotransferase. (388 aa)
argDAcetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. (393 aa)
yjiR_2Putative HTH-type transcriptional regulator YjiR. (462 aa)
wbpEUDP-2-acetamido-2-deoxy-3-oxo-D-glucuronate aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. (400 aa)
Your Current Organism:
Martelella mediterranea
NCBI taxonomy Id: 1122214
Other names: M. mediterranea DSM 17316, Martelella mediterranea DSM 17316
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