(24 nodes) Bacterial extracellular solute-binding proteins, family 5 Middle network (Martelella mediterranea)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	dppA_2	Dipeptide-binding protein. (495 aa)
	dppA_1	Dipeptide-binding protein. (519 aa)
	hbpA_1	Hemin-binding lipoprotein. (509 aa)
	dppA_3	Dipeptide-binding protein. (511 aa)
	ddpA_1	Putative D,D-dipeptide-binding periplasmic protein DdpA precursor. (528 aa)
	oppA	Periplasmic oligopeptide-binding protein precursor. (526 aa)
	AQZ49822.1	Putative ABC transporter-binding protein precursor. (698 aa)
	dppE	Dipeptide-binding protein DppE precursor. (522 aa)
	ddpA_2	Putative D,D-dipeptide-binding periplasmic protein DdpA precursor. (526 aa)
	AQZ49933.1	Putative ABC transporter-binding protein precursor. (652 aa)
	AQZ49950.1	Putative ABC transporter-binding protein precursor. (650 aa)
	dppA_4	Dipeptide-binding protein. (532 aa)
	appA_1	Oligopeptide-binding protein AppA precursor. (609 aa)
	gsiB_1	Glutathione-binding protein GsiB precursor. (496 aa)
	gsiB_2	Glutathione-binding protein GsiB precursor. (523 aa)
	gsiB_3	Glutathione-binding protein GsiB precursor. (503 aa)
	dppA_5	Dipeptide-binding protein. (499 aa)
	appA_2	Oligopeptide-binding protein AppA precursor. (518 aa)
	appA_3	Oligopeptide-binding protein AppA precursor. (605 aa)
	gsiB_4	Glutathione-binding protein GsiB precursor. (513 aa)
	ddpA_3	Putative D,D-dipeptide-binding periplasmic protein DdpA precursor. (503 aa)
	gsiB_5	Glutathione-binding protein GsiB precursor. (528 aa)
	gsiB_6	Glutathione-binding protein GsiB precursor. (520 aa)
	hbpA_2	Hemin-binding lipoprotein. (530 aa)

Your Current Organism:

Martelella mediterranea

NCBI taxonomy Id: 1122214
Other names: M. mediterranea DSM 17316, Martelella mediterranea DSM 17316

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AQZ49950.1	appA_1	Mame_00567	Mame_01266	Putative ABC transporter-binding protein precursor.	Oligopeptide-binding protein AppA precursor.	0.404
AQZ49950.1	appA_3	Mame_00567	Mame_02989	Putative ABC transporter-binding protein precursor.	Oligopeptide-binding protein AppA precursor.	0.404
AQZ49950.1	ddpA_2	Mame_00567	Mame_00471	Putative ABC transporter-binding protein precursor.	Putative D,D-dipeptide-binding periplasmic protein DdpA precursor.	0.482
AQZ49950.1	ddpA_3	Mame_00567	Mame_03201	Putative ABC transporter-binding protein precursor.	Putative D,D-dipeptide-binding periplasmic protein DdpA precursor.	0.454
AQZ49950.1	dppA_2	Mame_00567	Mame_00210	Putative ABC transporter-binding protein precursor.	Dipeptide-binding protein.	0.465
AQZ49950.1	dppA_5	Mame_00567	Mame_01844	Putative ABC transporter-binding protein precursor.	Dipeptide-binding protein.	0.484
AQZ49950.1	dppE	Mame_00567	Mame_00450	Putative ABC transporter-binding protein precursor.	Dipeptide-binding protein DppE precursor.	0.463
AQZ49950.1	gsiB_3	Mame_00567	Mame_01665	Putative ABC transporter-binding protein precursor.	Glutathione-binding protein GsiB precursor.	0.460
AQZ49950.1	gsiB_4	Mame_00567	Mame_03022	Putative ABC transporter-binding protein precursor.	Glutathione-binding protein GsiB precursor.	0.448
appA_1	AQZ49950.1	Mame_01266	Mame_00567	Oligopeptide-binding protein AppA precursor.	Putative ABC transporter-binding protein precursor.	0.404
appA_1	appA_3	Mame_01266	Mame_02989	Oligopeptide-binding protein AppA precursor.	Oligopeptide-binding protein AppA precursor.	0.450
appA_1	ddpA_1	Mame_01266	Mame_00326	Oligopeptide-binding protein AppA precursor.	Putative D,D-dipeptide-binding periplasmic protein DdpA precursor.	0.404
appA_1	ddpA_2	Mame_01266	Mame_00471	Oligopeptide-binding protein AppA precursor.	Putative D,D-dipeptide-binding periplasmic protein DdpA precursor.	0.404
appA_1	ddpA_3	Mame_01266	Mame_03201	Oligopeptide-binding protein AppA precursor.	Putative D,D-dipeptide-binding periplasmic protein DdpA precursor.	0.404
appA_1	dppA_1	Mame_01266	Mame_00021	Oligopeptide-binding protein AppA precursor.	Dipeptide-binding protein.	0.404
appA_1	dppA_2	Mame_01266	Mame_00210	Oligopeptide-binding protein AppA precursor.	Dipeptide-binding protein.	0.435
appA_1	dppA_3	Mame_01266	Mame_00281	Oligopeptide-binding protein AppA precursor.	Dipeptide-binding protein.	0.404
appA_1	dppA_4	Mame_01266	Mame_00639	Oligopeptide-binding protein AppA precursor.	Dipeptide-binding protein.	0.404
appA_1	dppA_5	Mame_01266	Mame_01844	Oligopeptide-binding protein AppA precursor.	Dipeptide-binding protein.	0.404
appA_1	dppE	Mame_01266	Mame_00450	Oligopeptide-binding protein AppA precursor.	Dipeptide-binding protein DppE precursor.	0.404