STRINGSTRING
SIS29428.1 SIS29428.1 SIS34854.1 SIS34854.1 pheA pheA SIS36035.1 SIS36035.1 SIS39359.1 SIS39359.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SIS29428.1Aspartate aminotransferase. (417 aa)
SIS34854.1Prephenate dehydrogenase. (280 aa)
pheAPrephenate dehydratase. (282 aa)
SIS36035.1Aspartate aminotransferase. (401 aa)
SIS39359.1Aspartate aminotransferase. (397 aa)
Your Current Organism:
Chryseobacterium joostei
NCBI taxonomy Id: 112234
Other names: C. joostei, CCUG 46665, Chryseobacterium joostei Hugo et al. 2003 emend. Montero-Calasanz et al. 2014, DSM 16927, LMG 18212, LMG:18212, strain Ix 5a
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