STRINGSTRING
GCA_000425285_00295 GCA_000425285_00295 GCA_000425285_00393 GCA_000425285_00393 GCA_000425285_00543 GCA_000425285_00543 nucS nucS FEZ32_11030 FEZ32_11030 GCA_000425285_00777 GCA_000425285_00777 GCA_000425285_01058 GCA_000425285_01058 GCA_000425285_01080 GCA_000425285_01080 glnE glnE whiB whiB GCA_000425285_01272 GCA_000425285_01272 C0Z10_03840 C0Z10_03840 GCA_000425285_01319 GCA_000425285_01319 C0Z10_07315 C0Z10_07315 GCA_000425285_01378 GCA_000425285_01378 C0Z10_07060 C0Z10_07060 C0Z10_06995 C0Z10_06995 rbpA-2 rbpA-2 pdtaR pdtaR whiB-2 whiB-2 pdtaS pdtaS GCA_000425285_02162 GCA_000425285_02162 GCA_000425285_02168 GCA_000425285_02168 GCA_000425285_02337 GCA_000425285_02337
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GCA_000425285_00295Unannotated protein. (250 aa)
GCA_000425285_00393Unannotated protein. (85 aa)
GCA_000425285_00543Unannotated protein. (287 aa)
nucSUnannotated protein; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family. (237 aa)
FEZ32_11030Unannotated protein. (189 aa)
GCA_000425285_00777Unannotated protein. (417 aa)
GCA_000425285_01058Unannotated protein. (246 aa)
GCA_000425285_01080Unannotated protein. (252 aa)
glnEUnannotated protein; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) [...] (991 aa)
whiBUnannotated protein; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. (85 aa)
GCA_000425285_01272Unannotated protein. (124 aa)
C0Z10_03840Unannotated protein. (85 aa)
GCA_000425285_01319Unannotated protein. (174 aa)
C0Z10_07315Unannotated protein. (134 aa)
GCA_000425285_01378Unannotated protein. (406 aa)
C0Z10_07060Unannotated protein. (98 aa)
C0Z10_06995Unannotated protein. (198 aa)
rbpA-2Unannotated protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. (118 aa)
pdtaRUnannotated protein. (219 aa)
whiB-2Unannotated protein; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. (83 aa)
pdtaSUnannotated protein. (496 aa)
GCA_000425285_02162Unannotated protein. (220 aa)
GCA_000425285_02168Unannotated protein. (232 aa)
GCA_000425285_02337Unannotated protein. (531 aa)
Your Current Organism:
Acidipropionibacterium jensenii
NCBI taxonomy Id: 1122997
Other names: A. jensenii DSM 20535, Acidipropionibacterium jensenii DSM 20535, Propionibacterium jensenii DSM 20535
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