STRINGSTRING
GCA_000428065_01513 GCA_000428065_01513 GCA_000428065_01514 GCA_000428065_01514 GCA_000428065_01515 GCA_000428065_01515 GCA_000428065_01516 GCA_000428065_01516 GCA_000428065_01517 GCA_000428065_01517
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GCA_000428065_01513Unannotated protein. (53 aa)
GCA_000428065_01514Unannotated protein. (238 aa)
GCA_000428065_01515Unannotated protein. (345 aa)
GCA_000428065_01516Unannotated protein. (686 aa)
GCA_000428065_01517Unannotated protein. (99 aa)
Your Current Organism:
Shimazuella kribbensis
NCBI taxonomy Id: 1123252
Other names: S. kribbensis DSM 45090, Shimazuella kribbensis DSM 45090
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