STRINGSTRING
GCA_000380645_00149 GCA_000380645_00149 GCA_000380645_01055 GCA_000380645_01055 GCA_000380645_01056 GCA_000380645_01056 GCA_000380645_01057 GCA_000380645_01057 GCA_000380645_01084 GCA_000380645_01084 GCA_000380645_01132 GCA_000380645_01132 GCA_000380645_03823 GCA_000380645_03823 GCA_000380645_04413 GCA_000380645_04413 GCA_000380645_04657 GCA_000380645_04657 GCA_000380645_04658 GCA_000380645_04658 GCA_000380645_04661 GCA_000380645_04661
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GCA_000380645_00149Unannotated protein. (361 aa)
GCA_000380645_01055Unannotated protein. (359 aa)
GCA_000380645_01056Unannotated protein. (518 aa)
GCA_000380645_01057Unannotated protein. (441 aa)
GCA_000380645_01084Unannotated protein. (165 aa)
GCA_000380645_01132Unannotated protein. (622 aa)
GCA_000380645_03823Unannotated protein. (779 aa)
GCA_000380645_04413Unannotated protein. (528 aa)
GCA_000380645_04657Unannotated protein. (137 aa)
GCA_000380645_04658Unannotated protein. (602 aa)
GCA_000380645_04661Unannotated protein. (116 aa)
Your Current Organism:
Smaragdicoccus niigatensis
NCBI taxonomy Id: 1123258
Other names: S. niigatensis DSM 44881 = NBRC 103563, Smaragdicoccus niigatensis DSM 44881, Smaragdicoccus niigatensis DSM 44881 = NBRC 103563, Smaragdicoccus niigatensis NBRC 103563, Smaragdicoccus niigatensis NBRC 103563 = DSM 44881
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