STRINGSTRING
GCA_000380645_01080 GCA_000380645_01080 GCA_000380645_01081 GCA_000380645_01081 GCA_000380645_01082 GCA_000380645_01082 GCA_000380645_02549 GCA_000380645_02549 GCA_000380645_02550 GCA_000380645_02550 GCA_000380645_02551 GCA_000380645_02551 GCA_000380645_02552 GCA_000380645_02552 GCA_000380645_02553 GCA_000380645_02553 GCA_000380645_02554 GCA_000380645_02554 GCA_000380645_02555 GCA_000380645_02555 GCA_000380645_03594 GCA_000380645_03594
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GCA_000380645_01080Unannotated protein. (119 aa)
GCA_000380645_01081Unannotated protein. (121 aa)
GCA_000380645_01082Unannotated protein. (243 aa)
GCA_000380645_02549Unannotated protein. (54 aa)
GCA_000380645_02550Unannotated protein. (147 aa)
GCA_000380645_02551Unannotated protein. (279 aa)
GCA_000380645_02552Unannotated protein. (497 aa)
GCA_000380645_02553Unannotated protein. (214 aa)
GCA_000380645_02554Unannotated protein. (122 aa)
GCA_000380645_02555Unannotated protein. (2078 aa)
GCA_000380645_03594Unannotated protein. (519 aa)
Your Current Organism:
Smaragdicoccus niigatensis
NCBI taxonomy Id: 1123258
Other names: S. niigatensis DSM 44881 = NBRC 103563, Smaragdicoccus niigatensis DSM 44881, Smaragdicoccus niigatensis DSM 44881 = NBRC 103563, Smaragdicoccus niigatensis NBRC 103563, Smaragdicoccus niigatensis NBRC 103563 = DSM 44881
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