STRINGSTRING
GCA_000380645_01094 GCA_000380645_01094 GCA_000380645_01093 GCA_000380645_01093 GCA_000380645_01096 GCA_000380645_01096 GCA_000380645_01095 GCA_000380645_01095 GCA_000380645_01092 GCA_000380645_01092
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GCA_000380645_01094Unannotated protein. (308 aa)
GCA_000380645_01093Unannotated protein. (493 aa)
GCA_000380645_01096Unannotated protein. (272 aa)
GCA_000380645_01095Unannotated protein. (545 aa)
GCA_000380645_01092Unannotated protein. (121 aa)
Your Current Organism:
Smaragdicoccus niigatensis
NCBI taxonomy Id: 1123258
Other names: S. niigatensis DSM 44881 = NBRC 103563, Smaragdicoccus niigatensis DSM 44881, Smaragdicoccus niigatensis DSM 44881 = NBRC 103563, Smaragdicoccus niigatensis NBRC 103563, Smaragdicoccus niigatensis NBRC 103563 = DSM 44881
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.