STRINGSTRING
GCA_000686625_00087 GCA_000686625_00087 GCA_000686625_00391 GCA_000686625_00391 GCA_000686625_01366 GCA_000686625_01366 speA speA GCA_000686625_02956 GCA_000686625_02956
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GCA_000686625_00087Unannotated protein. (337 aa)
GCA_000686625_00391Unannotated protein; Belongs to the Nudix hydrolase family. (195 aa)
GCA_000686625_01366Unannotated protein. (333 aa)
speAUnannotated protein. (463 aa)
GCA_000686625_02956Unannotated protein. (326 aa)
Your Current Organism:
Sphingobacterium thalpophilum
NCBI taxonomy Id: 1123265
Other names: S. thalpophilum DSM 11723, Sphingobacterium thalpophilum DSM 11723
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