STRINGSTRING
GCA_000686625_02408 GCA_000686625_02408 mazG mazG GCA_000686625_00079 GCA_000686625_00079 GCA_000686625_00161 GCA_000686625_00161 cdd cdd amn amn kynB kynB yedJ yedJ ycgM ycgM GCA_000686625_01093 GCA_000686625_01093 rny rny GCA_000686625_01341 GCA_000686625_01341 GCA_000686625_01588 GCA_000686625_01588 GCA_000686625_01590 GCA_000686625_01590 GCA_000686625_01876 GCA_000686625_01876 xseA xseA GCA_000686625_01946 GCA_000686625_01946 GCA_000686625_02221 GCA_000686625_02221 GCA_000686625_02410 GCA_000686625_02410 yfkN_1 yfkN_1 yfkN_2 yfkN_2 nfdA nfdA pnp pnp GCA_000686625_02958 GCA_000686625_02958 GCA_000686625_03220 GCA_000686625_03220 GCA_000686625_03221 GCA_000686625_03221 surE_1 surE_1 GCA_000686625_03422 GCA_000686625_03422 rnhA rnhA GCA_000686625_03637 GCA_000686625_03637 GCA_000686625_03667 GCA_000686625_03667 GCA_000686625_03815 GCA_000686625_03815 ypjD ypjD GCA_000686625_04086 GCA_000686625_04086 iorB iorB iorA iorA GCA_000686625_04173 GCA_000686625_04173 rnhB rnhB GCA_000686625_04385 GCA_000686625_04385 surE_2 surE_2 GCA_000686625_04498 GCA_000686625_04498 mqnB mqnB GCA_000686625_04578 GCA_000686625_04578 dgt dgt GCA_000686625_05086 GCA_000686625_05086 GCA_000686625_05090 GCA_000686625_05090
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GCA_000686625_02408Unannotated protein. (214 aa)
mazGUnannotated protein. (270 aa)
GCA_000686625_00079Unannotated protein. (286 aa)
GCA_000686625_00161Unannotated protein. (206 aa)
cddUnannotated protein. (131 aa)
amnUnannotated protein. (274 aa)
kynBUnannotated protein. (298 aa)
yedJUnannotated protein. (215 aa)
ycgMUnannotated protein. (203 aa)
GCA_000686625_01093Unannotated protein. (288 aa)
rnyUnannotated protein; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family. (517 aa)
GCA_000686625_01341Unannotated protein. (148 aa)
GCA_000686625_01588Unannotated protein. (385 aa)
GCA_000686625_01590Unannotated protein. (324 aa)
GCA_000686625_01876Unannotated protein. (135 aa)
xseAUnannotated protein; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. (432 aa)
GCA_000686625_01946Unannotated protein; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. (74 aa)
GCA_000686625_02221Unannotated protein. (394 aa)
GCA_000686625_02410Unannotated protein. (96 aa)
yfkN_1Unannotated protein; Belongs to the 5'-nucleotidase family. (319 aa)
yfkN_2Unannotated protein. (253 aa)
nfdAUnannotated protein. (549 aa)
pnpUnannotated protein; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. (728 aa)
GCA_000686625_02958Unannotated protein; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. (191 aa)
GCA_000686625_03220Unannotated protein. (285 aa)
GCA_000686625_03221Unannotated protein. (275 aa)
surE_1Unannotated protein; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. (247 aa)
GCA_000686625_03422Unannotated protein. (187 aa)
rnhAUnannotated protein; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (164 aa)
GCA_000686625_03637Unannotated protein. (150 aa)
GCA_000686625_03667Unannotated protein. (388 aa)
GCA_000686625_03815Unannotated protein. (198 aa)
ypjDUnannotated protein. (108 aa)
GCA_000686625_04086Unannotated protein. (416 aa)
iorBUnannotated protein. (763 aa)
iorAUnannotated protein. (156 aa)
GCA_000686625_04173Unannotated protein. (378 aa)
rnhBUnannotated protein; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (215 aa)
GCA_000686625_04385Unannotated protein. (188 aa)
surE_2Unannotated protein; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. (269 aa)
GCA_000686625_04498Unannotated protein. (287 aa)
mqnBUnannotated protein; Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2). (228 aa)
GCA_000686625_04578Unannotated protein. (299 aa)
dgtUnannotated protein. (452 aa)
GCA_000686625_05086Unannotated protein. (150 aa)
GCA_000686625_05090Unannotated protein. (145 aa)
Your Current Organism:
Sphingobacterium thalpophilum
NCBI taxonomy Id: 1123265
Other names: S. thalpophilum DSM 11723, Sphingobacterium thalpophilum DSM 11723
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