STRINGSTRING
C666_02555 C666_02555 C666_02550 C666_02550 C666_02545 C666_02545 C666_02540 C666_02540 rnhB rnhB C666_02510 C666_02510 C666_02500 C666_02500 C666_02490 C666_02490 C666_02485 C666_02485 frr frr pyrH pyrH
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
C666_02555Unannotated protein. (383 aa)
C666_02550Unannotated protein; Belongs to the UPF0246 family. (261 aa)
C666_02545Unannotated protein. (159 aa)
C666_02540Unannotated protein; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. (261 aa)
rnhBUnannotated protein; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (206 aa)
C666_02510Unannotated protein; Belongs to the skp family. (166 aa)
C666_02500Unannotated protein. (454 aa)
C666_02490Unannotated protein; Belongs to the CDS family. (273 aa)
C666_02485Unannotated protein; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. (262 aa)
frrUnannotated protein; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. (185 aa)
pyrHUnannotated protein; Catalyzes the reversible phosphorylation of UMP to UDP. (237 aa)
Your Current Organism:
Thauera linaloolentis
NCBI taxonomy Id: 1123367
Other names: T. linaloolentis 47Lol = DSM 12138, Thauera linaloolentis 47Lol, Thauera linaloolentis 47Lol = DSM 12138, Thauera linaloolentis DSM 12138, Thauera linaloolentis DSM 12138 = 47Lol, Thauera linaloolentis NBRC 102519
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