STRINGSTRING
AJ81_02285 AJ81_02285 trpB trpB AJ81_03255 AJ81_03255 AJ81_03260 AJ81_03260 AJ81_03265 AJ81_03265 hppA hppA AJ81_03280 AJ81_03280 AJ81_03285 AJ81_03285 dapH dapH AJ81_03295 AJ81_03295 AJ81_10280 AJ81_10280
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AJ81_02285Phosphoglycerate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (201 aa)
trpBTryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. (423 aa)
AJ81_03255Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (338 aa)
AJ81_03260Serine dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the iron-sulfur dependent L-serine dehydratase family. (294 aa)
AJ81_03265Serine dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the iron-sulfur dependent L-serine dehydratase family. (219 aa)
hppAPotassium transporter; Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na(+) movement across the membrane. Belongs to the H(+)-translocating pyrophosphatase (TC 3.A.10) family. K(+)-stimulated subfamily. (647 aa)
AJ81_03280Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (360 aa)
AJ81_03285Aminotransferase class III; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (393 aa)
dapH2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; Catalyzes the transfer of an acetyl group from acetyl-CoA to tetrahydrodipicolinate. (240 aa)
AJ81_03295Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (35 aa)
AJ81_10280Dipeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (464 aa)
Your Current Organism:
Pseudothermotoga hypogea
NCBI taxonomy Id: 1123384
Other names: P. hypogea DSM 11164 = NBRC 106472, Pseudothermotoga hypogea DSM 11164, Pseudothermotoga hypogea DSM 11164 = NBRC 106472, Pseudothermotoga hypogea NBRC 106472, Pseudothermotoga hypogea NBRC 106472 = DSM 11164, Thermotoga hypogea DSM 11164, Thermotoga hypogea DSM 11164 = NBRC 106472, Thermotoga hypogea NBRC 106472
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