STRINGSTRING
AJ81_03515 AJ81_03515 AJ81_05290 AJ81_05290 AJ81_09375 AJ81_09375 AJ81_07095 AJ81_07095 AJ81_06610 AJ81_06610
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AJ81_03515Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (550 aa)
AJ81_05290Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (640 aa)
AJ81_09375Peptidoglycan glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (596 aa)
AJ81_07095Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology. (342 aa)
AJ81_06610Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology. (453 aa)
Your Current Organism:
Pseudothermotoga hypogea
NCBI taxonomy Id: 1123384
Other names: P. hypogea DSM 11164 = NBRC 106472, Pseudothermotoga hypogea DSM 11164, Pseudothermotoga hypogea DSM 11164 = NBRC 106472, Pseudothermotoga hypogea NBRC 106472, Pseudothermotoga hypogea NBRC 106472 = DSM 11164, Thermotoga hypogea DSM 11164, Thermotoga hypogea DSM 11164 = NBRC 106472, Thermotoga hypogea NBRC 106472
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