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| | betI | HTH-type transcriptional regulator BetI; Repressor involved in choline regulation of the bet genes. (200 aa) |
| | SJN52712.1 | Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. (547 aa) |
| | etfA_1 | Electron transfer flavoprotein subunit alpha. (310 aa) |
| | etfB | Electron transfer flavoprotein subunit beta. (249 aa) |
| | acdA | Acyl-CoA dehydrogenase. (381 aa) |
| | queD | 6-carboxy-5,6,7,8-tetrahydropterin synthase. (118 aa) |
| | bglF_1 | PTS system beta-glucoside-specific EIIBCA component. (452 aa) |
| | etfA_2 | Electron transfer flavoprotein subunit alpha. (412 aa) |
| | SJN52786.1 | Membrane dipeptidase (Peptidase family M19). (325 aa) |
| | SJN52860.1 | Hypothetical protein. (609 aa) |
| | ramA | (R)-stereoselective amidase. (512 aa) |
| | rhlE | ATP-dependent RNA helicase RhlE; Belongs to the DEAD box helicase family. (396 aa) |
| | draG | ADP-ribosyl-[dinitrogen reductase] glycohydrolase. (340 aa) |
| | SJN53018.1 | Undecaprenyl pyrophosphate phosphatase. (177 aa) |
| | cptB | Antitoxin CptB. (86 aa) |
| | recO | DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. (243 aa) |
| | hemH | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. (325 aa) |
| | adk | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. (214 aa) |
| | SJN53281.1 | Epimerase family protein. (304 aa) |
| | SJN53282.1 | Sepiapterin reductase. (275 aa) |
| | trxA_1 | Thioredoxin-1. (284 aa) |
| | ybeY | Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. (154 aa) |
| | SJN53383.1 | Alpha/beta hydrolase family protein. (226 aa) |
| | tadA_1 | tRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. (173 aa) |
| | SJN53481.1 | Lipoprotein NlpI. (212 aa) |
| | atsA_1 | Arylsulfatase precursor. (510 aa) |
| | SJN53537.1 | S-type Pyocin. (524 aa) |
| | pgdA | Peptidoglycan deacetylase. (304 aa) |
| | pucG_1 | Purine catabolism protein PucG. (410 aa) |
| | amaB | N-carbamoyl-L-amino acid hydrolase. (413 aa) |
| | SJN53633.1 | Hypothetical protein. (254 aa) |
| | SJN53673.1 | Hypothetical protein. (228 aa) |
| | SJN53675.1 | 2OG-Fe(II) oxygenase superfamily protein. (230 aa) |
| | SJN53677.1 | Glutathione-dependent formaldehyde-activating enzyme. (133 aa) |
| | tetR | Tetracycline repressor protein class H. (231 aa) |
| | strB1 | Inosamine-phosphate amidinotransferase 1. (361 aa) |
| | SJN53750.1 | Ankyrin repeats (3 copies). (168 aa) |
| | mntB_1 | Manganese transport system membrane protein MntB. (270 aa) |
| | mntB_2 | Manganese transport system membrane protein MntB. (300 aa) |
| | raiA | Ribosome-associated inhibitor A. (109 aa) |
| | ribF | Riboflavin biosynthesis protein RibF; Belongs to the ribF family. (311 aa) |
| | rpsT | 30S ribosomal protein S20; Binds directly to 16S ribosomal RNA. (86 aa) |
| | srmB | ATP-dependent RNA helicase SrmB; DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit at low temperature. Exhibits RNA-stimulated ATP hydrolysis and RNA unwinding activity; Belongs to the DEAD box helicase family. SrmB subfamily. (430 aa) |
| | wzb | Low molecular weight protein-tyrosine-phosphatase wzb. (148 aa) |
| | murG_1 | UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase. (157 aa) |
| | rpsO | 30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. (89 aa) |
| | infB | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. (900 aa) |
| | nusA | Hypothetical protein; Participates in both transcription termination and antitermination. (495 aa) |
| | folK_1 | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridinepyrophosphokinase. (166 aa) |
| | SJN54108.1 | Hypothetical protein; Probable ATP-dependent helicase DinG homolog. (651 aa) |
| | SJN54146.1 | Hypothetical protein. (156 aa) |
| | nagL | Maleylpyruvate isomerase. (203 aa) |
| | thlA | Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (402 aa) |
| | phbC | Poly-beta-hydroxybutyrate polymerase. (608 aa) |
| | rbgA | Ribosome biogenesis GTPase A; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. (314 aa) |
| | deaD | ATP-dependent RNA helicase DeaD; Belongs to the DEAD box helicase family. (614 aa) |
| | SJN54313.1 | Glutathione-dependent formaldehyde-activating enzyme. (99 aa) |
| | SJN54314.1 | Hypothetical protein. (116 aa) |
| | yqjG | Glutathionyl-hydroquinone reductase YqjG. (315 aa) |
| | rarA | Replication-associated recombination protein A. (449 aa) |
| | bioB | Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. (350 aa) |
| | rlmF | Ribosomal RNA large subunit methyltransferase F; Specifically methylates the adenine in position 1618 of 23S rRNA. (379 aa) |
| | btrK | L-glutamyl-[BtrI acyl-carrier protein] decarboxylase. (418 aa) |
| | mmgC | Acyl-CoA dehydrogenase. (365 aa) |
| | topB | DNA topoisomerase 3; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (663 aa) |
| | baiA1 | Bile acid 7-dehydroxylase 1/3. (223 aa) |
| | ptrA_1 | Protease 3 precursor; Belongs to the peptidase M16 family. (925 aa) |
| | znuB | High-affinity zinc uptake system membrane protein ZnuB. (261 aa) |
| | bcp | Putative peroxiredoxin bcp. (155 aa) |
| | SJN54910.1 | Bifunctional UGMP family protein/serine/threonine protein kinase. (275 aa) |
| | SJN54912.1 | Aspartyl/Asparaginyl beta-hydroxylase. (249 aa) |
| | hemA | Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). (418 aa) |
| | ispE | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. (297 aa) |
| | ychF | Ribosome-binding ATPase YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. (363 aa) |
| | SJN55038.1 | 18 kDa heat shock protein; Belongs to the small heat shock protein (HSP20) family. (141 aa) |
| | dgk | Deoxyguanosine kinase. (246 aa) |
| | fadE | Acyl-coenzyme A dehydrogenase. (825 aa) |
| | dnaQ | DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. (245 aa) |
| | rnhA | Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (153 aa) |
| | rpsB | 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. (242 aa) |
| | xecA1 | 2-hydroxypropyl-CoM lyase. (362 aa) |
| | nadD | Putative nicotinate-nucleotide adenylyltransferase; Belongs to the NadD family. (171 aa) |
| | SJN55304.1 | Magnesium transporter MgtE. (448 aa) |
| | SJN55339.1 | Acetyltransferase (GNAT) family protein. (161 aa) |
| | pad1 | Putative aromatic acid decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. (194 aa) |
| | bicA | Bicarbonate transporter BicA. (519 aa) |
| | rpmF | 50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. (56 aa) |
| | ptsG_1 | PTS system glucose-specific EIICB component. (477 aa) |
| | ppsA_1 | Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family. (791 aa) |
| | SJN55507.1 | Acetyltransferase (GNAT) family protein. (160 aa) |
| | SJN55511.1 | Ankyrin repeats (3 copies). (172 aa) |
| | SJN55531.1 | Inosine 5'-monophosphate dehydrogenase. (626 aa) |
| | tadA_2 | tRNA-specific adenosine deaminase. (155 aa) |
| | dnaG | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (588 aa) |
| | rpsU | 30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. (71 aa) |
| | tsaD | tRNA N6-adenosine threonylcarbamoyltransferase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. (339 aa) |
| | folK_2 | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridinepyrophosphokinase. (167 aa) |
| | SJN55735.1 | Cupin domain protein. (108 aa) |
| | rpsP | 30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. (82 aa) |
| | rplS | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. (117 aa) |
| | rplM | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. (142 aa) |
| | rpsI | 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. (130 aa) |
| | sspB | Stringent starvation protein B. (159 aa) |
| | nfo | Endonuclease 4; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. (292 aa) |
| | SJN55937.1 | Cell envelope integrity inner membrane protein TolA. (336 aa) |
| | dinG | Putative ATP-dependent helicase DinG; DNA-dependent ATPase and 5'-3' DNA helicase. (693 aa) |
| | priC | Primosomal replication protein N''. (185 aa) |
| | SJN56035.1 | Acetyltransferase (GNAT) family protein. (142 aa) |
| | SJN56039.1 | Hypothetical protein. (80 aa) |
| | SJN56040.1 | Glutathione-dependent formaldehyde-activating enzyme. (57 aa) |
| | pheA_2 | Prephenate dehydratase. (290 aa) |
| | ppiA | Peptidyl-prolyl cis-trans isomerase A precursor; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (199 aa) |
| | csd_1 | Putative cysteine desulfurase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. (400 aa) |
| | argA | Amino-acid acetyltransferase. (421 aa) |
| | SJN56164.1 | Long-chain-fatty-acid--CoA ligase FadD15. (571 aa) |
| | SJN56204.1 | Hypothetical protein. (151 aa) |
| | lysA | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. (417 aa) |
| | ppsA_2 | Phosphoenolpyruvate synthase. (886 aa) |
| | SJN56368.1 | Hypothetical protein. (689 aa) |
| | matP | Macrodomain Ter protein; Required for spatial organization of the terminus region of the chromosome (Ter macrodomain) during the cell cycle. Prevents early segregation of duplicated Ter macrodomains during cell division. Binds specifically to matS, which is a 13 bp signature motif repeated within the Ter macrodomain. (149 aa) |
| | hrp1 | Hypoxic response protein 1. (631 aa) |
| | parB | Putative chromosome-partitioning protein ParB; Belongs to the ParB family. (297 aa) |
| | rpmH | 50S ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family. (44 aa) |
| | dnaA | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. (467 aa) |
| | recF_1 | DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. (359 aa) |
| | SJN56555.1 | Hypothetical protein. (508 aa) |
| | SJN56563.1 | Hypothetical protein. (184 aa) |
| | SJN56570.1 | Photosystem I assembly protein Ycf3. (336 aa) |
| | topA_2 | DNA topoisomerase 1. (193 aa) |
| | SJN56654.1 | Putative acyl-CoA thioester hydrolase. (133 aa) |
| | trxB | Thioredoxin reductase. (318 aa) |
| | SJN56706.1 | Hypothetical protein. (153 aa) |
| | polB | DNA polymerase II. (797 aa) |
| | rplY | 50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. (92 aa) |
| | nspC | Carboxynorspermidine/carboxyspermidine decarboxylase; Catalyzes the decarboxylation of carboxynorspermidine and carboxyspermidine; Belongs to the Orn/Lys/Arg decarboxylase class-II family. NspC subfamily. (377 aa) |
| | cobB_1 | NAD-dependent protein deacylase; Belongs to the sirtuin family. Class III subfamily. (242 aa) |
| | ligA_2 | DNA ligase. (286 aa) |
| | SJN56869.1 | Hypothetical protein. (255 aa) |
| | tfoX_1 | DNA transformation protein TfoX. (196 aa) |
| | ihfA | Integration host factor subunit alpha; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. (99 aa) |
| | SJN56965.1 | Formylglycine-generating sulfatase enzyme. (410 aa) |
| | SJN56970.1 | Formylglycine-generating sulfatase enzyme. (409 aa) |
| | SJN57046.1 | Hypothetical protein. (162 aa) |
| | isfD | Sulfoacetaldehyde reductase. (246 aa) |
| | recR | Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. (200 aa) |
| | ybaB | Nucleoid-associated protein YbaB; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. (110 aa) |
| | rssB | Regulator of RpoS. (368 aa) |
| | yfkJ | Low molecular weight protein-tyrosine-phosphatase YfkJ. (153 aa) |
| | rep | ATP-dependent DNA helicase Rep; Rep helicase is a single-stranded DNA-dependent ATPase involved in DNA replication; it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction. (673 aa) |
| | tfoX_2 | DNA transformation protein TfoX. (100 aa) |
| | recQ | ATP-dependent DNA helicase RecQ. (612 aa) |
| | slmA | Nucleoid occlusion factor SlmA; Required for nucleoid occlusion (NO) phenomenon, which prevents Z-ring formation and cell division over the nucleoid. Acts as a DNA-associated cell division inhibitor that binds simultaneously chromosomal DNA and FtsZ, and disrupts the assembly of FtsZ polymers. SlmA-DNA-binding sequences (SBS) are dispersed on non-Ter regions of the chromosome, preventing FtsZ polymerization at these regions. (198 aa) |
| | SJN57239.1 | Hypothetical protein; Belongs to the UPF0758 family. (224 aa) |
| | rpmB | 50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. (78 aa) |
| | rpmG | 50S ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family. (55 aa) |
| | SJN57301.1 | Hypothetical protein. (494 aa) |
| | SJN57337.1 | Sulfotransferase domain protein. (299 aa) |
| | SJN57338.1 | Hypothetical protein. (260 aa) |
| | hupA | DNA-binding protein HU-alpha; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. (90 aa) |
| | SJN57427.1 | Glutathionine S-transferase. (216 aa) |
| | rpmE | 50S ribosomal protein L31; Binds the 23S rRNA. (73 aa) |
| | priA | Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (738 aa) |
| | argC | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. (334 aa) |
| | argB | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. (264 aa) |
| | argH_2 | Argininosuccinate lyase. (460 aa) |
| | rpsJ | 30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. (103 aa) |
| | rplC | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. (209 aa) |
| | rplD | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. (200 aa) |
| | rplW | 50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. (100 aa) |
| | rplB | 50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. (274 aa) |
| | rpsS | 30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (92 aa) |
| | rplV | 50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. (110 aa) |
| | rpsC | 30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. (234 aa) |
| | rplP | 50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. (136 aa) |
| | rpmC | 50S ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. (63 aa) |
| | rpsQ | 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. (84 aa) |
| | rplN | 50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. (123 aa) |
| | rplX | 50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. (105 aa) |
| | rplE | 50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. (179 aa) |
| | rpsN | 30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. (101 aa) |
| | rpsH | 30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. (130 aa) |
| | rplF | 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. (177 aa) |
| | rplR | 50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. (117 aa) |
| | rpsE | 30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. (166 aa) |
| | rpmD | 50S ribosomal protein L30. (58 aa) |
| | rplO | 50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. (144 aa) |
| | rpmJ | 50S ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family. (37 aa) |
| | rpsM | 30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. (118 aa) |
| | rpsK | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. (129 aa) |
| | rpsD | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (206 aa) |
| | rplQ | 50S ribosomal protein L17. (126 aa) |
| | SJN57634.1 | Putative acyltransferase. (149 aa) |
| | ubiX | Putative aromatic acid decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. (207 aa) |
| | mgtE | Magnesium transporter MgtE; Acts as a magnesium transporter. (452 aa) |
| | smc | Chromosome partition protein Smc. (368 aa) |
| | pkn1 | Serine/threonine-protein kinase pkn1. (633 aa) |
| | tmcA | tRNA(Met) cytidine acetyltransferase TmcA; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of tRNA(Met), by using acetyl-CoA as an acetyl donor and ATP (or GTP). (679 aa) |
| | virB | Virulence regulon transcriptional activator VirB; Belongs to the ParB family. (321 aa) |
| | atsA_5 | Arylsulfatase precursor. (501 aa) |
| | SJN57896.1 | Ankyrin repeats (3 copies). (159 aa) |
| | aceB | Malate synthase A; Belongs to the malate synthase family. (545 aa) |
| | ulaG | Putative L-ascorbate-6-phosphate lactonase UlaG. (355 aa) |
| | mrr | Mrr restriction system protein. (268 aa) |
| | sbcD | Nuclease SbcCD subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. (377 aa) |
| | SJN58159.1 | S-type Pyocin. (524 aa) |
| | yusV_1 | Putative siderophore transport system ATP-binding protein YusV. (255 aa) |
| | SJN58218.1 | Hypothetical protein. (480 aa) |
| | SJN58295.1 | DNA-binding transcriptional repressor AcrR. (196 aa) |
| | prpB | Methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family. (298 aa) |
| | SJN58338.1 | Aromatic amino acid exporter. (272 aa) |
| | SJN58372.1 | Hypothetical protein. (139 aa) |
| | dnaB | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. (470 aa) |
| | rplI | 50S ribosomal protein L9; Binds to the 23S rRNA. (149 aa) |
| | rpsR | 30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. (75 aa) |
| | priB | Primosomal replication protein n; Binds single-stranded DNA at the primosome assembly site (PAS); Belongs to the PriB family. (100 aa) |
| | rpsF | 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. (126 aa) |
| | rpsG | 30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. (156 aa) |
| | rpsL | 30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. (124 aa) |
| | sdcS_2 | Sodium-dependent dicarboxylate transporter SdcS. (471 aa) |
| | icaR | Biofilm operon icaADBC HTH-type negative transcriptional regulator IcaR. (215 aa) |
| | nudC | NADH pyrophosphatase; Belongs to the Nudix hydrolase family. NudC subfamily. (262 aa) |
| | rplL | 50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. (123 aa) |
| | rplJ | 50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. (163 aa) |
| | rplA | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. (233 aa) |
| | rplK | 50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. (142 aa) |
| | nusG | Hypothetical protein; Participates in transcription elongation, termination and antitermination. (182 aa) |
| | SJN58464.1 | Acetyltransferase (GNAT) family protein. (146 aa) |
| | trxA_2 | Thioredoxin-1; Belongs to the thioredoxin family. (108 aa) |
| | SJN58480.1 | Putative nucleotidyltransferase substrate binding domain protein. (608 aa) |
| | fis | DNA-binding protein Fis; Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters; Belongs to the transcriptional regulatory Fis family. (98 aa) |
| | purD | Phosphoribosylamine--glycine ligase; Belongs to the GARS family. (428 aa) |
| | dtd | D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. (144 aa) |
| | ihfB | Integration host factor subunit beta; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. (94 aa) |
| | rpsA | 30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. (556 aa) |
| | hupB | DNA-binding protein HU-beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. (90 aa) |
| | selO | Hypothetical protein; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). Belongs to the SELO family. (488 aa) |
| | ptsG_2 | PTS system glucose-specific EIICB component. (500 aa) |
| | SJN58709.1 | Hypothetical protein. (206 aa) |
| | rplT | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (117 aa) |
| | rpmI | 50S ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. (64 aa) |
| | SJN58770.1 | Hypothetical protein; Conserved phage C-terminus (Phg_2220_C). (284 aa) |
| | SJN58812.1 | Putative DEAD-box ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. (443 aa) |
| | nagK_2 | Fumarylpyruvate hydrolase. (204 aa) |
| | bglF_5 | PTS system beta-glucoside-specific EIIBCA component. (461 aa) |
| | bglF_6 | PTS system beta-glucoside-specific EIIBCA component. (636 aa) |
| | SJN58891.1 | Hypothetical protein. (267 aa) |
| | dnaC | DNA replication protein DnaC. (241 aa) |
| | rapL | L-lysine cyclodeaminase. (319 aa) |
| | SJN58990.1 | Prephenate dehydratase. (194 aa) |
| | SJN59005.1 | Hypothetical protein. (549 aa) |
| | SJN59007.1 | Translation initiation factor IF-2. (630 aa) |
| | SJN59099.1 | Hypothetical protein. (545 aa) |
| | kptA | RNA 2'-phosphotransferase; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase. (189 aa) |
| | ogt | Methylated-DNA--protein-cysteine methyltransferase. (110 aa) |
| | SJN59278.1 | Hypothetical protein. (196 aa) |
| | lplT | Lysophospholipid transporter LplT. (623 aa) |
| | menF | Menaquinone-specific isochorismate synthase; Catalyzes the conversion of chorismate to isochorismate. (434 aa) |
| | yusV_2 | Putative siderophore transport system ATP-binding protein YusV. (272 aa) |
| | SJN59357.1 | HNH endonuclease. (359 aa) |
| | yqgF | Putative Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. (141 aa) |
| | SJN59462.1 | Stage II sporulation protein E (SpoIIE). (198 aa) |
| | apaG | CO2+/MG2+ efflux protein ApaG. (126 aa) |
| | rpmA | 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. (85 aa) |
| | rplU | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. (103 aa) |
| | SJN59568.1 | Formylglycine-generating sulfatase enzyme. (279 aa) |
| | SJN59577.1 | 2-oxoglutaramate amidase. (277 aa) |
| | mreB | Rod shape-determining protein MreB. (347 aa) |
| | pucG_2 | Purine catabolism protein PucG. (376 aa) |
| | nhaP | Na(+)/H(+) antiporter NhaP. (438 aa) |
| | adhE_2 | Aldehyde-alcohol dehydrogenase. (381 aa) |
| | eutB | Ethanolamine ammonia-lyase heavy chain. (466 aa) |
| | eutC | Ethanolamine ammonia-lyase light chain; Belongs to the EutC family. (289 aa) |
| | sseA | 3-mercaptopyruvate sulfurtransferase. (278 aa) |
| | SJN59715.1 | Hypothetical protein. (250 aa) |
| | recN | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. (555 aa) |
| | dnaJ | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] (381 aa) |
| | dhbC | Isochorismate synthase DhbC. (393 aa) |
| | SJN59743.1 | Ornithine cyclodeaminase. (379 aa) |
| | yghU | Disulfide-bond oxidoreductase YghU. (286 aa) |
| | SJN59765.1 | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain). (79 aa) |
| | SJN59806.1 | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain). (150 aa) |
| | SJN59831.1 | Ankyrin repeats (3 copies). (176 aa) |
| | SJN59851.1 | Enhanced serine sensitivity protein SseB. (265 aa) |
| | SJN59871.1 | Tropinesterase. (264 aa) |
| | holC | DNA polymerase III subunit chi. (149 aa) |
| | SJN59904.1 | Ankyrin repeats (3 copies). (176 aa) |
| | SJN59906.1 | Ankyrin repeats (3 copies). (172 aa) |
| | SJN59919.1 | Hypothetical protein; Belongs to the UPF0251 family. (91 aa) |
| | tfoX_3 | DNA transformation protein TfoX. (201 aa) |
| | nth | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (210 aa) |
| | truA | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (279 aa) |
| | plsB | Glycerol-3-phosphate acyltransferase; Belongs to the GPAT/DAPAT family. (807 aa) |
| | lcfB_2 | Long-chain-fatty-acid--CoA ligase. (511 aa) |
| | SJN59984.1 | Hypothetical protein. (215 aa) |
| | fabG_5 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (271 aa) |
| | ectC | L-ectoine synthase; Catalyzes the circularization of gamma-N-acetyl-alpha,gamma- diaminobutyric acid (ADABA) to ectoine (1,4,5,6-tetrahydro-2-methyl-4- pyrimidine carboxylic acid), which is an excellent osmoprotectant. (127 aa) |
| | yhhW | Quercetin 2,3-dioxygenase; Belongs to the pirin family. (285 aa) |
| | SJN60012.1 | Putative acyl-CoA thioester hydrolase. (161 aa) |
| | ldc | Lysine/ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (404 aa) |
