STRINGSTRING
lpxL lpxL ZBT109_0212 ZBT109_0212 ZBT109_2411 ZBT109_2411 kdsB kdsB ZBT109_1529 ZBT109_1529 arnF arnF ZBT109_1559 ZBT109_1559 arnD arnD ZBT109_1561 ZBT109_1561 arnC arnC ZBT109_1563 ZBT109_1563 ZBT109_1564 ZBT109_1564 kdsA kdsA ZBT109_1836 ZBT109_1836 ZBT109_1837 ZBT109_1837 ZBT109_1178 ZBT109_1178 ZBT109_1246 ZBT109_1246 ZBT109_1253 ZBT109_1253 ZBT109_2294 ZBT109_2294 ZBT109_2296 ZBT109_2296 ZBT109_2055 ZBT109_2055 ZBT109_2025 ZBT109_2025 ZBT109_2024 ZBT109_2024 ZBT109_2023 ZBT109_2023 ZBT109_2022 ZBT109_2022 ZBT109_2021 ZBT109_2021 ZBT109_1664 ZBT109_1664 ZBT109_2127 ZBT109_2127 ZBT109_0344 ZBT109_0344 ZBT109_1410 ZBT109_1410 ZBT109_1394 ZBT109_1394 opgH opgH ZBT109_0150 ZBT109_0150 ZBT109_0140 ZBT109_0140 kdkA kdkA ZBT109_0137 ZBT109_0137 ZBT109_0135 ZBT109_0135 ZBT109_0100 ZBT109_0100 ZBT109_0099 ZBT109_0099 ZBT109_0010 ZBT109_0010
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
lpxLUnannotated protein; Catalyzes the transfer of laurate from lauroyl-acyl carrier protein (ACP) to Kdo(2)-lipid IV(A) to form Kdo(2)-(lauroyl)-lipid IV(A). (309 aa)
ZBT109_0212Unannotated protein; Belongs to the membrane-bound acyltransferase family. (484 aa)
ZBT109_2411Unannotated protein; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs). (535 aa)
kdsBUnannotated protein; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria. (260 aa)
ZBT109_1529Unannotated protein. (534 aa)
arnFUnannotated protein; Translocates 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol (alpha-L-Ara4N-phosphoundecaprenol) from the cytoplasmic to the periplasmic side of the inner membrane; Belongs to the ArnF family. (144 aa)
ZBT109_1559Unannotated protein; Translocates 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol (alpha-L-Ara4N-phosphoundecaprenol) from the cytoplasmic to the periplasmic side of the inner membrane. (119 aa)
arnDUnannotated protein; Catalyzes the deformylation of 4-deoxy-4-formamido-L- arabinose-phosphoundecaprenol to 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides; Belongs to the polysaccharide deacetylase family. ArnD deformylase subfamily. (310 aa)
ZBT109_1561Unannotated protein; Bifunctional enzyme that catalyzes the oxidative decarboxylation of UDP-glucuronic acid (UDP-GlcUA) to UDP-4-keto- arabinose (UDP-Ara4O) and the addition of a formyl group to UDP-4- amino-4-deoxy-L-arabinose (UDP-L-Ara4N) to form UDP-L-4-formamido- arabinose (UDP-L-Ara4FN). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides; In the N-terminal section; belongs to the Fmt family. UDP- L-Ara4N formyltransferase subfamily. (659 aa)
arnCUnannotated protein; Catalyzes the transfer of 4-deoxy-4-formamido-L-arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides. (350 aa)
ZBT109_1563Unannotated protein; Belongs to the DegT/DnrJ/EryC1 family. (383 aa)
ZBT109_1564Unannotated protein. (575 aa)
kdsAUnannotated protein; Belongs to the KdsA family. (283 aa)
ZBT109_1836Unannotated protein. (239 aa)
ZBT109_1837Unannotated protein. (238 aa)
ZBT109_1178Unannotated protein. (356 aa)
ZBT109_1246Unannotated protein. (349 aa)
ZBT109_1253Unannotated protein. (389 aa)
ZBT109_2294Unannotated protein; Belongs to the mannose-6-phosphate isomerase type 2 family. (477 aa)
ZBT109_2296Unannotated protein. (649 aa)
ZBT109_2055Unannotated protein. (310 aa)
ZBT109_2025Unannotated protein. (433 aa)
ZBT109_2024Unannotated protein. (351 aa)
ZBT109_2023Unannotated protein. (463 aa)
ZBT109_2022Unannotated protein. (433 aa)
ZBT109_2021Unannotated protein. (450 aa)
ZBT109_1664Unannotated protein. (422 aa)
ZBT109_2127Unannotated protein; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family. (206 aa)
ZBT109_0344Unannotated protein; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family. (294 aa)
ZBT109_1410Unannotated protein. (401 aa)
ZBT109_1394Unannotated protein; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs). (533 aa)
opgHUnannotated protein; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs). (832 aa)
ZBT109_0150Unannotated protein. (573 aa)
ZBT109_0140Unannotated protein. (363 aa)
kdkAUnannotated protein; Catalyzes the ATP-dependent phosphorylation of the 3-deoxy-D- manno-octulosonic acid (Kdo) residue in Kdo-lipid IV(A) at the 4-OH position; Belongs to the protein kinase superfamily. KdkA/RfaP family. (243 aa)
ZBT109_0137Unannotated protein. (355 aa)
ZBT109_0135Unannotated protein; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. (424 aa)
ZBT109_0100Unannotated protein. (254 aa)
ZBT109_0099Unannotated protein. (357 aa)
ZBT109_0010Unannotated protein. (378 aa)
Your Current Organism:
Zymobacter palmae
NCBI taxonomy Id: 1123510
Other names: Z. palmae DSM 10491, Zymobacter palmae DSM 10491
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