STRINGSTRING
thyA thyA OJA03954.1 OJA03954.1 OJA04016.1 OJA04016.1 OJA04023.1 OJA04023.1 OJA04192.1 OJA04192.1 serC serC gcvP gcvP gcvH gcvH gcvT gcvT folD folD OJA04476.1 OJA04476.1 OJA04527.1 OJA04527.1 cysS cysS purU purU metN metN OJA07337.1 OJA07337.1 OJA04711.1 OJA04711.1 OJA04712.1 OJA04712.1 metZ metZ OJA05115.1 OJA05115.1 OJA05216.1 OJA05216.1 OJA05340.1 OJA05340.1 OJA05364.1 OJA05364.1 metE metE thrB thrB OJA05782.1 OJA05782.1 OJA05789.1 OJA05789.1 OJA07404.1 OJA07404.1 OJA05790.1 OJA05790.1 OJA05818.1 OJA05818.1 OJA05834.1 OJA05834.1 OJA05862.1 OJA05862.1 OJA05947.1 OJA05947.1 OJA05954.1 OJA05954.1 OJA05971.1 OJA05971.1 OJA06246.1 OJA06246.1 OJA07453.1 OJA07453.1 metXS metXS metK metK OJA06533.1 OJA06533.1 OJA06557.1 OJA06557.1 OJA06561.1 OJA06561.1 OJA06562.1 OJA06562.1 OJA06563.1 OJA06563.1 OJA06564.1 OJA06564.1 OJA06565.1 OJA06565.1 OJA06576.1 OJA06576.1 OJA06578.1 OJA06578.1 OJA07457.1 OJA07457.1 glyA glyA OJA06580.1 OJA06580.1 OJA06581.1 OJA06581.1 OJA06582.1 OJA06582.1 OJA06583.1 OJA06583.1 purU-2 purU-2 OJA06585.1 OJA06585.1 OJA06639.1 OJA06639.1 OJA06640.1 OJA06640.1 OJA06670.1 OJA06670.1 OJA06784.1 OJA06784.1 OJA06817.1 OJA06817.1 OJA06951.1 OJA06951.1 OJA06952.1 OJA06952.1 OJA06953.1 OJA06953.1 OJA07012.1 OJA07012.1 OJA07202.1 OJA07202.1 glyA-2 glyA-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
thyAThymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis. (272 aa)
OJA03954.1Diacylglycerol kinase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis. (185 aa)
OJA04016.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (209 aa)
OJA04023.1Phosphoserine phosphatase SerB; Derived by automated computational analysis using gene prediction method: Protein Homology. (313 aa)
OJA04192.1Cysteine synthase B; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cysteine synthase/cystathionine beta- synthase family. (302 aa)
serCPhosphoserine transaminase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. (367 aa)
gcvPGlycine dehydrogenase (aminomethyl-transferring); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. (964 aa)
gcvHGlycine cleavage system protein H; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. (129 aa)
gcvTGlycine cleavage system protein T; Catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (370 aa)
folDBifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. (290 aa)
OJA04476.1Amino acid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (413 aa)
OJA04527.1Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. (1231 aa)
cysScysteine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family. (471 aa)
purUFormyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4). (284 aa)
metNDL-methionine transporter ATP-binding subunit; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (352 aa)
OJA07337.1Methionine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (217 aa)
OJA04711.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (263 aa)
OJA04712.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (161 aa)
metZO-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide. (404 aa)
OJA05115.1Threonine aldolase; Catalyzes the cleavage of L-allo-threonine and L-threonine to glycine and acetaldehyde. (348 aa)
OJA05216.13-phosphoglycerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (315 aa)
OJA05340.1L-serine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the iron-sulfur dependent L-serine dehydratase family. (455 aa)
OJA05364.1Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. (366 aa)
metE5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. (765 aa)
thrBHomoserine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pseudomonas-type ThrB family. (319 aa)
OJA05782.1D-amino acid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (424 aa)
OJA05789.1GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (495 aa)
OJA07404.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (444 aa)
OJA05790.1NAD(P)-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa)
OJA05818.1O-acetylhomoserine aminocarboxypropyltransferase; Catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol; Derived by automated computational analysis using gene prediction method: Protein Homology. (424 aa)
OJA05834.1Homocysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (297 aa)
OJA05862.1O-acetylhomoserine aminocarboxypropyltransferase; Catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol; Derived by automated computational analysis using gene prediction method: Protein Homology. (424 aa)
OJA05947.1Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (248 aa)
OJA05954.1D-3-phosphoglycerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (414 aa)
OJA05971.1Phosphoglucomutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (199 aa)
OJA06246.15-formyltetrahydrofolate cyclo-ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. (204 aa)
OJA07453.1Methionine biosynthesis protein MetW; Derived by automated computational analysis using gene prediction method: Protein Homology. (197 aa)
metXSHomoserine O-acetyltransferase; Transfers a succinyl group from succinyl-CoA to L-homoserine, forming succinyl-L-homoserine. (408 aa)
metKMethionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. (406 aa)
OJA06533.1Methylenetetrahydrofolate reductase [NAD(P)H]; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the methylenetetrahydrofolate reductase family. (280 aa)
OJA06557.1Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (388 aa)
OJA06561.1AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (380 aa)
OJA06562.1Peptidase M19; Derived by automated computational analysis using gene prediction method: Protein Homology. (325 aa)
OJA06563.1Hydrocarbon binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (181 aa)
OJA06564.1N-methylproline demethylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (698 aa)
OJA06565.1(Fe-S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (667 aa)
OJA06576.1N-methylproline demethylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (683 aa)
OJA06578.1Rieske (2Fe-2S) protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (428 aa)
OJA07457.1Hybrid-cluster NAD(P)-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (368 aa)
glyASerine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. (437 aa)
OJA06580.1Sarcosine oxidase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. (416 aa)
OJA06581.1Sarcosine oxidase subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology. (113 aa)
OJA06582.1Sarcosine oxidase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family. (1016 aa)
OJA06583.1Sarcosine oxidase subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology. (211 aa)
purU-2Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4). (288 aa)
OJA06585.1L-serine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the iron-sulfur dependent L-serine dehydratase family. (460 aa)
OJA06639.1Homoserine dehydrogenase; Catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; Derived by automated computational analysis using gene prediction method: Protein Homology. (438 aa)
OJA06640.1Threonine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (462 aa)
OJA06670.1Alanine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the AlaDH/PNT family. (372 aa)
OJA06784.1Serine O-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (295 aa)
OJA06817.1Homoserine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the AB hydrolase superfamily. MetX family. (397 aa)
OJA06951.1Threonine aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (335 aa)
OJA06952.1Amino acid oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (406 aa)
OJA06953.1Spermidine acetyltransferase; Catalyzes the formation of N(1)- and N(8)-acetylspermidine from spermidine; Derived by automated computational analysis using gene prediction method: Protein Homology. (183 aa)
OJA07012.1Class V aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (374 aa)
OJA07202.1Aminotransferase; Broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; Derived by automated computational analysis using gene prediction method: Protein Homology. (415 aa)
glyA-2Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. (421 aa)
Your Current Organism:
Halomonas sp. QHL1
NCBI taxonomy Id: 1123773
Other names: H. sp. QHL1
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