STRINGSTRING
thyA thyA OJA03954.1 OJA03954.1 OJA04016.1 OJA04016.1 gcvP gcvP gcvH gcvH gcvT gcvT folD folD OJA04476.1 OJA04476.1 purU purU OJA05115.1 OJA05115.1 OJA05364.1 OJA05364.1 OJA05782.1 OJA05782.1 OJA05789.1 OJA05789.1 OJA07404.1 OJA07404.1 OJA05790.1 OJA05790.1 OJA05947.1 OJA05947.1 OJA06246.1 OJA06246.1 OJA06561.1 OJA06561.1 OJA06562.1 OJA06562.1 OJA06563.1 OJA06563.1 OJA06564.1 OJA06564.1 OJA06565.1 OJA06565.1 OJA06576.1 OJA06576.1 OJA06578.1 OJA06578.1 OJA07457.1 OJA07457.1 glyA glyA OJA06580.1 OJA06580.1 OJA06581.1 OJA06581.1 OJA06582.1 OJA06582.1 OJA06583.1 OJA06583.1 purU-2 purU-2 OJA06670.1 OJA06670.1 OJA06951.1 OJA06951.1 OJA06952.1 OJA06952.1 OJA06953.1 OJA06953.1 OJA07012.1 OJA07012.1 OJA07202.1 OJA07202.1 glyA-2 glyA-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
thyAThymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis. (272 aa)
OJA03954.1Diacylglycerol kinase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis. (185 aa)
OJA04016.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (209 aa)
gcvPGlycine dehydrogenase (aminomethyl-transferring); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. (964 aa)
gcvHGlycine cleavage system protein H; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. (129 aa)
gcvTGlycine cleavage system protein T; Catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (370 aa)
folDBifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. (290 aa)
OJA04476.1Amino acid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (413 aa)
purUFormyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4). (284 aa)
OJA05115.1Threonine aldolase; Catalyzes the cleavage of L-allo-threonine and L-threonine to glycine and acetaldehyde. (348 aa)
OJA05364.1Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. (366 aa)
OJA05782.1D-amino acid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (424 aa)
OJA05789.1GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (495 aa)
OJA07404.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (444 aa)
OJA05790.1NAD(P)-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa)
OJA05947.1Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (248 aa)
OJA06246.15-formyltetrahydrofolate cyclo-ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. (204 aa)
OJA06561.1AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (380 aa)
OJA06562.1Peptidase M19; Derived by automated computational analysis using gene prediction method: Protein Homology. (325 aa)
OJA06563.1Hydrocarbon binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (181 aa)
OJA06564.1N-methylproline demethylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (698 aa)
OJA06565.1(Fe-S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (667 aa)
OJA06576.1N-methylproline demethylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (683 aa)
OJA06578.1Rieske (2Fe-2S) protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (428 aa)
OJA07457.1Hybrid-cluster NAD(P)-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (368 aa)
glyASerine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. (437 aa)
OJA06580.1Sarcosine oxidase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. (416 aa)
OJA06581.1Sarcosine oxidase subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology. (113 aa)
OJA06582.1Sarcosine oxidase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family. (1016 aa)
OJA06583.1Sarcosine oxidase subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology. (211 aa)
purU-2Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4). (288 aa)
OJA06670.1Alanine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the AlaDH/PNT family. (372 aa)
OJA06951.1Threonine aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (335 aa)
OJA06952.1Amino acid oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (406 aa)
OJA06953.1Spermidine acetyltransferase; Catalyzes the formation of N(1)- and N(8)-acetylspermidine from spermidine; Derived by automated computational analysis using gene prediction method: Protein Homology. (183 aa)
OJA07012.1Class V aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (374 aa)
OJA07202.1Aminotransferase; Broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; Derived by automated computational analysis using gene prediction method: Protein Homology. (415 aa)
glyA-2Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. (421 aa)
Your Current Organism:
Halomonas sp. QHL1
NCBI taxonomy Id: 1123773
Other names: H. sp. QHL1
Server load: low (22%) [HD]