Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| OJA04023.1 | OJA04192.1 | QHL1GM_00700 | QHL1GM_01585 | Phosphoserine phosphatase SerB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cysteine synthase B; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.857 |
| OJA04023.1 | OJA04527.1 | QHL1GM_00700 | QHL1GM_03490 | Phosphoserine phosphatase SerB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.849 |
| OJA04023.1 | OJA05216.1 | QHL1GM_00700 | QHL1GM_07355 | Phosphoserine phosphatase SerB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 3-phosphoglycerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.569 |
| OJA04023.1 | OJA05340.1 | QHL1GM_00700 | QHL1GM_08040 | Phosphoserine phosphatase SerB; Derived by automated computational analysis using gene prediction method: Protein Homology. | L-serine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the iron-sulfur dependent L-serine dehydratase family. | 0.854 |
| OJA04023.1 | OJA05954.1 | QHL1GM_00700 | QHL1GM_11465 | Phosphoserine phosphatase SerB; Derived by automated computational analysis using gene prediction method: Protein Homology. | D-3-phosphoglycerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.569 |
| OJA04023.1 | OJA05971.1 | QHL1GM_00700 | QHL1GM_11560 | Phosphoserine phosphatase SerB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphoglucomutase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.698 |
| OJA04023.1 | OJA06533.1 | QHL1GM_00700 | QHL1GM_14670 | Phosphoserine phosphatase SerB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Methylenetetrahydrofolate reductase [NAD(P)H]; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the methylenetetrahydrofolate reductase family. | 0.421 |
| OJA04023.1 | OJA06585.1 | QHL1GM_00700 | QHL1GM_14955 | Phosphoserine phosphatase SerB; Derived by automated computational analysis using gene prediction method: Protein Homology. | L-serine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the iron-sulfur dependent L-serine dehydratase family. | 0.854 |
| OJA04023.1 | OJA06639.1 | QHL1GM_00700 | QHL1GM_15250 | Phosphoserine phosphatase SerB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Homoserine dehydrogenase; Catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.844 |
| OJA04023.1 | OJA06640.1 | QHL1GM_00700 | QHL1GM_15255 | Phosphoserine phosphatase SerB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Threonine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.658 |
| OJA04023.1 | OJA06784.1 | QHL1GM_00700 | QHL1GM_15995 | Phosphoserine phosphatase SerB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Serine O-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.946 |
| OJA04023.1 | OJA06817.1 | QHL1GM_00700 | QHL1GM_16180 | Phosphoserine phosphatase SerB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Homoserine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the AB hydrolase superfamily. MetX family. | 0.921 |
| OJA04023.1 | OJA07453.1 | QHL1GM_00700 | QHL1GM_14530 | Phosphoserine phosphatase SerB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Methionine biosynthesis protein MetW; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.438 |
| OJA04023.1 | cysS | QHL1GM_00700 | QHL1GM_04060 | Phosphoserine phosphatase SerB; Derived by automated computational analysis using gene prediction method: Protein Homology. | cysteine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.797 |
| OJA04023.1 | metE | QHL1GM_00700 | QHL1GM_09080 | Phosphoserine phosphatase SerB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. | 0.539 |
| OJA04023.1 | metXS | QHL1GM_00700 | QHL1GM_14535 | Phosphoserine phosphatase SerB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Homoserine O-acetyltransferase; Transfers a succinyl group from succinyl-CoA to L-homoserine, forming succinyl-L-homoserine. | 0.921 |
| OJA04023.1 | metZ | QHL1GM_00700 | QHL1GM_04640 | Phosphoserine phosphatase SerB; Derived by automated computational analysis using gene prediction method: Protein Homology. | O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide. | 0.471 |
| OJA04023.1 | serC | QHL1GM_00700 | QHL1GM_02810 | Phosphoserine phosphatase SerB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphoserine transaminase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. | 0.963 |
| OJA04192.1 | OJA04023.1 | QHL1GM_01585 | QHL1GM_00700 | Cysteine synthase B; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Phosphoserine phosphatase SerB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.857 |
| OJA04192.1 | OJA04527.1 | QHL1GM_01585 | QHL1GM_03490 | Cysteine synthase B; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.908 |
page 1 of 15