STRINGSTRING
OJA07142.1 OJA07142.1 OJA03971.1 OJA03971.1 OJA03982.1 OJA03982.1 OJA04034.1 OJA04034.1 OJA04219.1 OJA04219.1 OJA04294.1 OJA04294.1 OJA07311.1 OJA07311.1 gabD gabD OJA04919.1 OJA04919.1 OJA04927.1 OJA04927.1 OJA04944.1 OJA04944.1 OJA05122.1 OJA05122.1 OJA05290.1 OJA05290.1 OJA05375.1 OJA05375.1 OJA05765.1 OJA05765.1 gabD-2 gabD-2 QHL1GM_10885 QHL1GM_10885 OJA05863.1 OJA05863.1 OJA05874.1 OJA05874.1 QHL1GM_11230 QHL1GM_11230 OJA06101.1 OJA06101.1 OJA06498.1 OJA06498.1 OJA06824.1 OJA06824.1 OJA06828.1 OJA06828.1 OJA06965.1 OJA06965.1 OJA07141.1 OJA07141.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
OJA07142.1Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (479 aa)
OJA03971.13-keto-5-aminohexanoate cleavage protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (280 aa)
OJA03982.1NADPH:quinone reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (297 aa)
OJA04034.1EF-P beta-lysylation protein EpmB; Derived by automated computational analysis using gene prediction method: Protein Homology. (344 aa)
OJA04219.1enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (371 aa)
OJA04294.1Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (488 aa)
OJA07311.1Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (586 aa)
gabDSuccinate-semialdehyde dehydrogenase (NADP(+)); Catalyzes the formation of succinate from succinate semialdehyde; NADP dependent; Derived by automated computational analysis using gene prediction method: Protein Homology. (485 aa)
OJA04919.1Multifunctional fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family. (728 aa)
OJA04927.1acetyl-CoA acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (395 aa)
OJA04944.1acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (400 aa)
OJA05122.1Gamma-butyrobetaine,2-oxoglutarate dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (393 aa)
OJA05290.1Succinate-semialdehyde dehydrogenase; In Escherichia coli this enzyme appears to be an NAD+/NADP+-dependent succinate semialdehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (460 aa)
OJA05375.1Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. (451 aa)
OJA05765.14-aminobutyrate transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (423 aa)
gabD-2Succinate-semialdehyde dehydrogenase (NADP(+)); Catalyzes the formation of succinate from succinate semialdehyde; NADP dependent; Derived by automated computational analysis using gene prediction method: Protein Homology. (483 aa)
QHL1GM_10885FAD-linked oxidase; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (417 aa)
OJA05863.1Gamma-butyrobetaine,2-oxoglutarate dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (372 aa)
OJA05874.1Taurine catabolism dioxygenase TauD; Derived by automated computational analysis using gene prediction method: Protein Homology. (410 aa)
QHL1GM_11230Integrase; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (458 aa)
OJA06101.13-keto-5-aminohexanoate cleavage protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (273 aa)
OJA06498.1acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (392 aa)
OJA06824.14-aminobutyrate transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (425 aa)
OJA06828.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (392 aa)
OJA06965.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LDH2/MDH2 oxidoreductase family. (338 aa)
OJA07141.1Dihydrolipoamide succinyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). (523 aa)
Your Current Organism:
Halomonas sp. QHL1
NCBI taxonomy Id: 1123773
Other names: H. sp. QHL1
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